BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06036 (UTR included)
(3601 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2484_C1 1921 0.0
>BF14_2484_C1
Length = 1745
Score = 1921 bits (969), Expect = 0.0
Identities = 1005/1017 (98%)
Strand = Plus / Plus
Query: 2089 attcgtgggtcaagctcaatcctggaacagtggggtattaccgcactcgttacccggccg 2148
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcgtgggtcaagctcaatccaggaacagtggggtattaccgcactcgttacccggccg 60
Query: 2149 ccatgctggagcagctggtgcgtgctgtgagggacggcagtctgccgccgctcgacaggc 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatgctggagcagctggtgcgtgctgtgagggacggcagtctgccgccgctcgacaggc 120
Query: 2209 tcggactgctggatgattgtttcgcactcgttcaggctggacacgcacacacatccgagt 2268
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcggactgctggatgactgtttcgcactcgttcaggctggacacgcacacacatccgagt 180
Query: 2269 cattaaaactcatggaggcgttcaacaacgaagccaacttcaccgtttggtcgtctattt 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattaaaactcatggaggcgttcaacaacgaagccaacttcaccgtttggtcgtctattt 240
Query: 2329 caaactgcctcgccaagctgagcgctttgttttcacacacgcctctcgacaagccgctga 2388
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 caaactgcctcgccaagctgagcgctttgttttcacacacccctctcgacaagccgctga 300
Query: 2389 agaactatggtaggaagttatttgctaacgtcacccgtcgcctgggatgggatgccaaag 2448
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaactacggcaggaagttatttgctaacgtcacccgtcgcctgggatgggatgccaaag 360
Query: 2449 ataaggaaagccatctcgacactttgctcagaagcttagtgttgaataaaatgatcagct 2508
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataaggaaagccatctcgatactttgctcagaagcttagtgttgaataaaatgatcagct 420
Query: 2509 tcgaagaccctgacacgattaaggaggctcagagccgcttcgagaagcacctgtcgggcg 2568
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgaagaccccgacacgattaaggaggctcagagccgcttcgagaagcacctgtcgggcg 480
Query: 2569 agtgtaccctgccggcggacctgcgctcggcgtgttaccgcgcggtgttggcgagcgccg 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgtaccctgccggcggacctgcgctcggcgtgttaccgcgcggtgttggcgagcgccg 540
Query: 2629 gcgaggacaccttcggtcgcttcctgcagctgtaccgcgccgctgacctccacgaggaga 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgaggacaccttcggtcgcttcctgcagctgtaccgcgccgctgacctccacgaggaga 600
Query: 2689 aggaccgcatcagccgagctctcggggcggtcaatgaccccgcgctgctcaaaaaagtgc 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggaccgcatcagccgagctctcggggcggtcaatgaccccgcgctgctcaaaaaagtgc 660
Query: 2749 tggagttcgctatatctgacgaggttagggcacaggacaccgtcttcgtcattgtgtcgg 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tggagttcgctatatctgacgaggttagggcacaggacaccgtcttcgtcattgtgtcgg 720
Query: 2809 tggctttgagccgtaatggacgggatttagcctggcagttcttcaaggaccattggcagg 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggctttgagccgtaatggacgggatttagcctggcagttcttcaaggaccattggcagg 780
Query: 2869 aatttatggaccgttaccagggcggcttcctgctggctcggctggtgaagtcgactactg 2928
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 781 aatttatggaccgttaccagggcggcttcctgctggctcggctggtgaagtcaactactg 840
Query: 2929 agaattttgcgtctgaagcatgcgctcaggagatcgaggagttcttccgcactcatcact 2988
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 841 agaattttgcgtctgaagcatgcgctcaagagatcgaggagttcttccgcactcatcact 900
Query: 2989 cgcccggcactgagcggtccgtgcaacaagccttggagaccgtcaggctgaacgcggcct 3048
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cacccggcactgagcggtccgtgcaacaagccttggagaccgtcaggctgaacgcggcct 960
Query: 3049 ggctacggagagacctcgcctccaccaccacatacctccagccttatcactgatacg 3105
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 961 ggctccggagagacctcgcctccaccaccacgtacctccagccttatcactgatacg 1017
Score = 682 bits (344), Expect = 0.0
Identities = 350/352 (99%)
Strand = Plus / Plus
Query: 3250 gcccaaataacaaaagactgaacatccaacgaaacactatatttatgtttagcgagccgt 3309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gcccaaataacaaaagactgaacatccaacgaaacactatatttatgtttagcgagccgt 1076
Query: 3310 gtctttgaaaaattctatttccatgattagtcgttagctactcaaccatccatatataca 3369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1077 gtctttgaaaaattctatttccatgattagtcgttagctactcaaccatccatataaaca 1136
Query: 3370 tatataggtcgaaatgaaagaaaaacttgtgttgcttggtgttgtctctaagtggcttaa 3429
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1137 tatataggtcgaaatgaaagaaaaatttgtgttgcttggtgttgtctctaagtggcttaa 1196
Query: 3430 aaatgatttattactatatattttgtatgaataacgcttatggacgtagaacaggatatt 3489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 aaatgatttattactatatattttgtatgaataacgcttatggacgtagaacaggatatt 1256
Query: 3490 gttaaattttaaaaataaaaatttaaatattctccaaaatgaaaacaaaatttatgactt 3549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gttaaattttaaaaataaaaatttaaatattctccaaaatgaaaacaaaatttatgactt 1316
Query: 3550 tattgttttaaatgttacaaaaacaagtaaaaattataaaaatgtttctttt 3601
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 tattgttttaaatgttacaaaaacaagtaaaaattataaaaatgtttctttt 1368
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,003
Number of extensions: 8136
Number of successful extensions: 8136
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8136
Number of HSP's successfully gapped: 2
Length of query: 3601
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3583
Effective length of database: 8,109,745
Effective search space: 29057216335
Effective search space used: 29057216335
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)