BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17264 (UTR included)
(995 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2H09 1243 0.0
>BF01031A2H09
Length = 686
Score = 1243 bits (627), Expect = 0.0
Identities = 670/683 (98%), Gaps = 1/683 (0%)
Strand = Plus / Plus
Query: 306 gagctccttccgcggcctcgcagccctcgccctcgtctcgtctctgttacacgcgggtct 365
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1 gagctccttccgcggcctcgcagccctcgccctcctctcgtctctgttacacgcggctct 60
Query: 366 gttcaccctcgtcaccaggagagatgataagaacaagcgggtgtcgcctgaaggagagaa 425
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 gttcaccctcgtcaccaggagagatgacaagaacaagcgggtgtcgcctgaaggagagaa 120
Query: 426 aatgttggacaacgccatctaccgggagacggttgtacctctaacagacaaacaaactga 485
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 aatgttggacaacgccatctaccgggagaccgttgtacctctaacagacaaacaaactga 180
Query: 486 acacttataggtgtaatatatatattatatgttaattaagatttaatttcttaatgttta 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acacttataggtgtaatatatatattatatgttaattaagatttaatttcttaatgtttc 240
Query: 546 cattaaagtcaacacgaatcaaagatgtcaagtacaaactgatacgtaacgccattttgt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattaaagtcaacacgaatcaaagatgtcaagtacaaactgatacgtaacgccattttgt 300
Query: 606 taatttttgtcgtatattttatttgtatatttgtatttttattattaacgttcgttcata 665
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 taatttttgtcgtatattttatttgtatatttgt-tttttattattaacgttcgttcata 359
Query: 666 acttgatgtgccattgatagaggcttcgtggtagccatgacgttgttagagcgagatggc 725
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acttgttgtgccattgatagaggcttcgtggtagccatgacgttgttagagcgagatggc 419
Query: 726 aataatattacatacgggtgtgaaacagacagataattaaataatagtactatgagcttg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aataatattacatacgggtgtgaaacagacagataattaaataatagtactatgagcttg 479
Query: 786 ccggggatagctgaaggttagggcgagcgagatagcaatataaatacagggagcagtgaa 845
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acggggatagctcaaggttagggcgagcgagatagcaatataaatacagggagcagtgaa 539
Query: 846 agagacaaaatacatctttattggtgatgttacaaataggcaataataaagttaaggtgt 905
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 540 agagacaaaatatatctttattggtgatgttacaaataggcaataataaagtttaggtgt 599
Query: 906 tagactgaattgtaggaccgagatagcaataacttacagtgagagagggaaagagatgga 965
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tagactgaaatgcaggaccgagatagcaataacttacagtgagagagggaaagagatgga 659
Query: 966 agattcattattatataattttt 988
|||||||||||||||||||||||
Sbjct: 660 agattcattattatataattttt 682
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 123,996
Number of extensions: 3087
Number of successful extensions: 3087
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3084
Number of HSP's successfully gapped: 1
Length of query: 995
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 978
Effective length of database: 8,119,229
Effective search space: 7940605962
Effective search space used: 7940605962
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)