BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15495 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2E04 1637 0.0
BF01027A1F05 84 1e-15
>BF01062B2E04
Length = 837
Score = 1637 bits (826), Expect = 0.0
Identities = 834/837 (99%)
Strand = Plus / Plus
Query: 387 aatcataacaaactggttaatttacattacatactaaatgttatgttatcataaaaatat 446
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcataacaaactagttaatttacattacatactaaatgttatgttatcataaaaatat 60
Query: 447 tatatatattattaataataattaacattacttcagtttccaattattgttaaaatgtca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatatatattattaataataattaacattacttcagtttccaattattgttaaaatgtca 120
Query: 507 tctcaaccatccaaaagaattgaaaggttatgcggtttatgtgagaacaattcaagcaaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcaaccatccaaaagaattgaaaggttatgcggtttatgtgagaacaattcaagcaaa 180
Query: 567 tattgttgccctcgttgcgaagtattttattgctcacttgactgttacaagtctgaaaag 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattgttgccctcgttgcgaagtattttattgctcacttgactgttacaagtctgaaaag 240
Query: 627 catttggaatgttcagagaatttttatcgagaatgtgtgaatcaagaacttgcttcgaac 686
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttggaatgttcagagaacttttatcgagaatgtgtgaatcaagaacttgcttcgaac 300
Query: 687 acggcggacgatgaagctaaaaacaaaatgatagatattctaaaaaggatgcacaatgaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acggcggacgatgaagctaaaaacaaaatgatagatattctaaaaaggatgcacaatgaa 360
Query: 747 agctttgacaatgatttagaaaacatagaagaaccagtagagattgactcggatgatgat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctttgacaatgatttagaaaacatagaagaaccagtagagattgactcggatgatgat 420
Query: 807 tctgaaattgatttgcatacaaggatcaaagatttgaatttagatgatccagatgcactt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgaaattgatttgcatacaaggatcaaagatttgaatttagatgatccagatgcactt 480
Query: 867 tggaatgcactcacatctgatgaaaagaatgaatttgaggccatgctcagtcagggtgat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggaatgcactcacatctgatgaaaagaatgaatttgaggccatgctcagtcagggtgat 540
Query: 927 gttgggactataattccacagtggcaaccttggtggctgttcagaaaggaaaagaaactg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttgggactataattccacagtggcaaccttggtggctgttcagaaaggaaaagaaactg 600
Query: 987 gttgaagaagtagatcttaatggtgaaaaggaagcacttgaaaggtgtcctacaattaaa 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttgaagaagtagatcttaatggtgaaaaggaagcacttgaaaggtgtcctacaattaaa 660
Query: 1047 acagtccctaaatttagttcgctaactagtattcagccttcgccatcaataaggtttaat 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acagtccctaaatttagttcgctaactagtattcagccttcgccatcaataaggtttaat 720
Query: 1107 atggtaaatatcatagccgcatatgcctttgctataagatatgttaatggggaaattaat 1166
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 atggtaaatatcatagccgcatatgcctttgctatangatatgttaatggggaaattaat 780
Query: 1167 catatagaaatatgcacatatattcttgaagtgtgcagtaatctgaaaactaatact 1223
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catatagaaatatgcacatatattcttgaagtgtgcagtaatctgaaaactaatact 837
>BF01027A1F05
Length = 806
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 2063 ttaatagaatatcaacatgatcaacaactcgaatggacaaaa 2104
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttaatagaatatcaacatgatcaacaactcgaatggacaaaa 765
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,620
Number of extensions: 7893
Number of successful extensions: 7893
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7893
Number of HSP's successfully gapped: 2
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)