BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17986 (UTR included)
(4597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 117 2e-25
BF01049B1F01 109 4e-23
BF14_335_C4 98 2e-19
BF01016A2B02 88 1e-16
BF14_335_C2 88 1e-16
BF01016B1E06 82 9e-15
BF14_335_C5 82 9e-15
BF01014B2F02 80 4e-14
BF01043B1E03 78 1e-13
BF01044B2F11 74 2e-12
>BF01019A1H08
Length = 504
Score = 117 bits (59), Expect = 2e-25
Identities = 87/94 (92%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 587 agataggggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cct 645
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 490 agataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcct 431
Query: 646 ctccctgcaa--cgatggatccgacacccgcacg 677
|||||||||| ||||||| ||| ||||||||||
Sbjct: 430 ctccctgcaacgcgatggacccggcacccgcacg 397
>BF01049B1F01
Length = 840
Score = 109 bits (55), Expect = 4e-23
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 593 gggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cctctccct 651
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
Query: 652 gcaacga 658
|||||||
Sbjct: 592 gcaacga 586
>BF14_335_C4
Length = 1491
Score = 97.6 bits (49), Expect = 2e-19
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 594 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc 642
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc 1294
>BF01016A2B02
Length = 780
Score = 87.7 bits (44), Expect = 1e-16
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 587 agataggggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cct 645
||||||||||| ||||| |||||||||| ||||||| ||||||||||||||||||| |||
Sbjct: 295 agataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcct 236
Query: 646 ctccctgcaacg 657
|||||| |||||
Sbjct: 235 ctcccttcaacg 224
>BF14_335_C2
Length = 1827
Score = 87.7 bits (44), Expect = 1e-16
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 599 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cctctccctgcaacg 657
|||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
>BF01016B1E06
Length = 606
Score = 81.8 bits (41), Expect = 9e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 593 gggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cctctccct 651
|||||||||||||||||||||||||||| | |||| |||||||||||||| |||||| ||
Sbjct: 257 gggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctct 198
Query: 652 gcaac 656
|||||
Sbjct: 197 gcaac 193
>BF14_335_C5
Length = 1597
Score = 81.8 bits (41), Expect = 9e-15
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 591 aggggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cctctcc 649
|||||| |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 1491 aggggcgccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctcc 1550
Query: 650 ctgcaacgatggatccgacacccgcacg 677
||||| |||| | ||| ||||||||||
Sbjct: 1551 gtgcaaagatgcacccggcacccgcacg 1578
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 4e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 607 tacacctgggtcgcaagtcccaggcactgttgaagc-cctctccctgcaacgatggatcc 665
|||||||||||||||||||| |||| ||| |||||| ||||||||||||||| |||| ||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 666 gacacccgcacg 677
| ||||||||||
Sbjct: 563 ggcacccgcacg 552
>BF01043B1E03
Length = 830
Score = 77.8 bits (39), Expect = 1e-13
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 587 agataggggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cct 645
|||||||||||| ||||||||| |||||||| |||||||||| ||||| ||| | | |||
Sbjct: 383 agataggggccctttaaacctatacctgggttgcaagtcccaagcactattggacctcct 442
Query: 646 ctccctgcaacgatggatccgacacccgcac 676
||||| ||||||||||| ||| |||| ||||
Sbjct: 443 ctcccagcaacgatggacccgtcacctgcac 473
>BF01044B2F11
Length = 728
Score = 73.8 bits (37), Expect = 2e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 587 agataggggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagc-cct 645
||||||||||| |||||||||||||||| | |||||||||||| |||| ||||| |||
Sbjct: 637 agataggggccacttaaacctacacctgaattgcaagtcccaggtgctgtcgaagctcct 696
Query: 646 ctccctgcaacga 658
|||||||||||||
Sbjct: 697 ctccctgcaacga 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 408,182
Number of extensions: 7743
Number of successful extensions: 7743
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 7737
Number of HSP's successfully gapped: 10
Length of query: 4597
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4579
Effective length of database: 8,109,745
Effective search space: 37134522355
Effective search space used: 37134522355
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)