BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04387 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_27_C1 1822 0.0
>BF14_27_C1
Length = 949
Score = 1822 bits (919), Expect = 0.0
Identities = 922/923 (99%)
Strand = Plus / Plus
Query: 461 accagatctattgtaaatatcaacaactaatactgcgagtatgtacaagtacgctctcat 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accagatctattgtaaatatcaacaactaatactgcgagtatgtacaagtacgctctcat 60
Query: 521 agtgacggcgctgttcggtcttaccgtctgcgaggagagacctcataagacccagtatgt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgacggcgctgttcggtcttaccgtctgcgaggagagacctcataagacccagtatgt 120
Query: 581 tgaccctttcgcgatgatcgatcggcatctcacgcattccctcgcctaccattacctgtg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaccctttcgcgatgatcgatcggcatctcacgcattccctcgcctaccattacctgtg 180
Query: 641 gccgtggagtcaactcatcagagccgcggcggctctggacgtagaggagagtttggaaga 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccgtggagtcaactcatcagagccgcggcggctctggacgtagaggagagtttggaaga 240
Query: 701 cccacagattatctctgactcggaaaaatatcaagtcaatctcagtgtccggagatttaa 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccacagattatctctgactcggaaaaatatcaagtcaatctcagtgtccggagatttaa 300
Query: 761 gccggaggaattaaaaattaaagtcaagaatcgatacatcatagtcgaaggaaaacacaa 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccggaggaattaaaaattaaagtcaagaatcgatacatcatagtcgaaggaaaacacaa 360
Query: 821 agaacaagataatgataaaaaaatcatggcaaatcactttgtgcaacgattcgtgttacc 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 agaacaagataatgataaaaaaatcatggcaaatcactttgtgcaacgattcgtgctacc 420
Query: 881 accaggaacaaaacaagaagaagttacagctgtcttgaacgaaaaaaatattttaacgat 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accaggaacaaaacaagaagaagttacagctgtcttgaacgaaaaaaatattttaacgat 480
Query: 941 ctcggctcccaaacatgaaataccacctccacctccagagagagaagttcccattgaagt 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcggctcccaaacatgaaataccacctccacctccagagagagaagttcccattgaagt 540
Query: 1001 tctgtcgaagacggaagagacagaaggtcagacggaaaaaaataaactcgaaaaacaaac 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctgtcgaagacggaagagacagaaggtcagacggaaaaaaataaactcgaaaaacaaac 600
Query: 1061 gccgtctcccgtcatagagacgtcggcgacgcctgaagaacaagtcgacccagaggcgac 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgtctcccgtcatagagacgtcggcgacgcctgaagaacaagtcgacccagaggcgac 660
Query: 1121 gacacacatcggaaaaataagaaagaaggaattgaaaacaacgacaaaagcgaccaaata 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacacacatcggaaaaataagaaagaaggaattgaaaacaacgacaaaagcgaccaaata 720
Query: 1181 taacgaagccacgaaaagtatcgaaagcaacggattggattatggtgtcgttgaaggtga 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taacgaagccacgaaaagtatcgaaagcaacggattggattatggtgtcgttgaaggtga 780
Query: 1241 cgagtgaacgattactgtaagacaatgagaaaagactgatgcgggctttagagtgagcgc 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgagtgaacgattactgtaagacaatgagaaaagactgatgcgggctttagagtgagcgc 840
Query: 1301 tgaccccgccagctctctagtagtgatgtgattccgtgatttattaaagataatagtttt 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgaccccgccagctctctagtagtgatgtgattccgtgatttattaaagataatagtttt 900
Query: 1361 agtaataaatatgttatttatta 1383
|||||||||||||||||||||||
Sbjct: 901 agtaataaatatgttatttatta 923
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,235
Number of extensions: 5397
Number of successful extensions: 5397
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5397
Number of HSP's successfully gapped: 1
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)