BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15147 (UTR included)
(4789 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1730_C1 1568 0.0
BF01034B2C01 678 0.0
>BF14_1730_C1
Length = 833
Score = 1568 bits (791), Expect = 0.0
Identities = 823/833 (98%), Gaps = 4/833 (0%)
Strand = Plus / Plus
Query: 2932 tttgggacgatcttccccaagtcgccttagatacaaacatgttggaacatctttttgaat 2991
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2 tttgggacgatcttccccaagtcgccttagatacaa-catgttggaacatctttttgaat 60
Query: 2992 ctaggtctaatgatctcattataaag---aaactaatggaaccaaagagaaatctgatct 3048
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ctaggtctaatgatctcattataaaggaaaaactaatggaaccaaagagaaatctgatct 120
Query: 3049 tggacgctaagcgatcaaacgctatcaatatagcgatgaaaaaattaccaactccgcaaa 3108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggacgctaagcgatcaaacgctatcaatatagcgatgaaaaaattaccaactccgcaaa 180
Query: 3109 caataaaggcagccattatgaagatggatgccactgtcatcggaagagagggcattgaga 3168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caataaaggcagccattatgaagatggatgccactgtcatcggaagagagggcattgaga 240
Query: 3169 agttactgaccatgctgcctactcaagaagaaaaagttaagattcaggaagcacagtatg 3228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agttactgaccatgctgcctactcaagaagaaaaagttaagattcaggaagcacagtatg 300
Query: 3229 cgaaccctgaccttcccctgggcagtgcggagcagttccttctcaccctcgcttccatca 3288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgaaccctgaccttcccctgggcagtgcggagcagttccttctcaccctcgcttccatca 360
Query: 3289 atgagctttcttcgaggctcaagctgtgggtcttcaagctggactttgacaatttggaaa 3348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgagctttcttcgaggctcaagctgtgggtcttcaagctggactttgacaatttggaaa 420
Query: 3349 aagagatagccgaacccctaatggaccttaagcagggtattgaactgcttaaagtaaaca 3408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagagatagccgaacccctaatggaccttaagcagggtattgaactgcttaaagtaaaca 480
Query: 3409 agacttttaaggtaatccttgcaaccttgaggtcagttggcagttttctaaatggcacgc 3468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agacttttaaggtaatccttgcaaccttgaggtcagttggcagttttctaaatggcacgc 540
Query: 3469 aagtcaagggattccgactggattatctttcaaaggttatggaggtcaaagatactgttc 3528
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 541 aagtcaagggattccgactggattacctttcaaaggttatggaggtcaaagatactgttc 600
Query: 3529 acaaacatcctctattataccatatttgcgagatgataatagagaagttcccagatacaa 3588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaaacatcctctattataccatatttgcgagatgataatagagaagttcccagatacaa 660
Query: 3589 cagatttcttcagcgaggttggtcccgtgatacgagcttcgaaagttgacttcgaagtcc 3648
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 661 cagatttcttcagcgaggttggtcccgtgatacgagcttcgaaagtcgacttcgaagtcc 720
Query: 3649 ttagttccaaccttgtgaaactagaagcagactgcaaagcttcctgggatcatatgaaac 3708
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 721 ttagttccaaccttgtgaaactagaagcagactgcaaagcttccnnnnatcatatgaaac 780
Query: 3709 gtgtcgctaagcacgacagctcccaaatttttaagaccaagatcaacgaattc 3761
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgtcgctaagcacgacagctcccaaatttttaagaccaagatcaacgaattc 833
>BF01034B2C01
Length = 751
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 3957 ttagagaagagggccaatcatcgagagaggaataagactagggggaaaatgattatcgat 4016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ttagagaagagggccaatcatcgagagaggaataagactagggggaaaatgattatcgat 112
Query: 4017 atgggcaactacagtgggaagtcgggcgatgcctgcgcggacaccgccctcaaagagctg 4076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgggcaactacagtgggaagtcgggcgatgcctgcgcggacaccgccctcaaagagctg 172
Query: 4077 ttgcgagctgatggaccggagcgtcacatcagacggaacgcacaccctgtgttgaatggc 4136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttgcgagctgatggaccggagcgtcacatcagacggaacgcacaccctgtgttgaatggc 232
Query: 4137 gacgcgacagctgacgaagaaatcataaaaagccttgtacgttgtccagcgtccaagaga 4196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gacgcgacagctgacgaagaaatcataaaaagccttgtacgttgtccagcgtccaagaga 292
Query: 4197 cgtccgctcgctagggaccgtcgccgaaacaggctcgtcgatagaaactccatgaatcgg 4256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cgtccgctcgctagggaccgtcgccgaaacaggctcgtcgatagaaactccatgaatcgg 352
Query: 4257 actatcgacggacaccagtcatggcctagctagtaatattgt 4298
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 actatcgacggacaccagtcatggcctagctagtaatattgt 394
Score = 147 bits (74), Expect = 2e-34
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 4704 gttatcatcatgttatttattgtaatgaaatctcagcatcagttagcagagttgaattta 4763
||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct: 393 gttatcatcatgttatttattataatgaaatctcagcgtcagtgagcagagttgaattta 452
Query: 4764 acgaataagttttctttctgtattat 4789
||||||||||||||||||||||||||
Sbjct: 453 acgaataagttttctttctgtattat 478
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 467,855
Number of extensions: 8379
Number of successful extensions: 8379
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8376
Number of HSP's successfully gapped: 3
Length of query: 4789
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4771
Effective length of database: 8,109,745
Effective search space: 38691593395
Effective search space used: 38691593395
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)