BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17600 (UTR included)
(2566 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_200_C1 1986 0.0
BF01010B1C12 248 4e-65
>BF14_200_C1
Length = 1043
Score = 1986 bits (1002), Expect = 0.0
Identities = 1023/1030 (99%)
Strand = Plus / Plus
Query: 1412 tgacgaagggaaagagatcgtggtcatcggcagcaaggccaagaacttgaattgcgatca 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgacgaagggaaagagatcgtggtcatcggcagcaaggccaagaacttgaattgcgatca 63
Query: 1472 tctagtcatcggtataaacgagtgtcccaaggatctactgtcctcggagccgagcgagag 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tctagtcatcggtataaacgagtgtcccaaggatctactgtcctcggagccgagcgagag 123
Query: 1532 ctctgatatatccaaggctatattcattaccaatggcactataatgccaagcgagaaaga 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctctgatatatccaaggctatattcattaccaatggcactataatgccaagcgagaaaga 183
Query: 1592 accgctgaccctactgagattcccgccgctagatgaaggtgacaaccctgttactgttct 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 184 accgctgaccctactgagattcccgccgctagatgaaggtgacaaccctgttactgtact 243
Query: 1652 cgaagtcggaccagccaccggctcctgccctaaaggcctcttcgccgtttacttcataac 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgaagtcggaccagccaccggctcctgccctaaaggcctcttcgccgtttacttcataac 303
Query: 1712 gaacaaggttaaggatgccgagagcgatctcatgaagtacgcggagaagatcttcgacat 1771
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 304 gaacaaggttaaggatgctgagagtgatctcatgaagtacgcggagaagatcttcgacat 363
Query: 1772 gactggagaccagaccaaggctggagacaagccgacgtgcctgtggtctctgttctacaa 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gactggagaccagaccaaggctggagacaagccgacgtgcctgtggtctctgttctacaa 423
Query: 1832 cgtgaaggatgtgagcgcgggagtacgtgacggcgttgagacggtccacgtgtgtgccgg 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cgtgaaggatgtgagcgcgggagtacgtgacggcgttgagacggtccacgtgtgtgccgg 483
Query: 1892 accagacgccgggctggacttcgaccgcgccgtactccaggcggaacaaatcttcaagaa 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 accagacgccgggctggacttcgaccgcgccgtactccaggcggaacaaatcttcaagaa 543
Query: 1952 gatctgcccgggcgaggagttcttgccccgcgccccggatcctgaagacatcgtcttcga 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gatctgcccgggcgaggagttcttgccccgcgccccggatcctgaagacatcgtcttcga 603
Query: 2012 ggatgacgtcactcacgggccggagttccgcggcgacgaaggagacaaagagtaaagatc 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggatgacgtcactcacgggccggagttccgcggcgacgaaggagacaaagagtaaagatc 663
Query: 2072 tagataatacagcacgtcttacagttatagatttagcgttttaactatttcaaggtcaat 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tagataatacagcacgtcttacagttatagatttagcgttttaactatttcaaggtcaat 723
Query: 2132 tcgatgcctgctgaaaatatgtttacaatacatgtagcatttagatcattgtacgcagct 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcgatgcctgctgaaaatatgtttacaatacatgtagcatttagatcattgtacgcagct 783
Query: 2192 tacatcgattataacatatcttaatagtgtagacattttaactgaatatatattgatctc 2251
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tacatcgattataacatatctgaatagtgtagacattttaactgaatatatattgatctc 843
Query: 2252 ctgtaaacgcgtgctggttagctgtaaggtgtaatccaactaagattttataagctttcg 2311
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ctgtaaacacgtgctggttagctgtaaggtgtaatccaactaagattttataagctttcg 903
Query: 2312 cttcgattaatgcattccggctggtgtggaaggtttgggatacgggacgtgctgatattt 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 904 cttcgattaatgcattccggctggtgtggaaggtttgggatacgggacgtgctaatattt 963
Query: 2372 cgcgcgggttgcatttgttttttgtattcatagtttttgtatgacattgaaaattctcat 2431
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 964 cgcgcgggttgcatttgttttttatattcatagtttttgtatgacattgaaaattctcat 1023
Query: 2432 aacgaatttt 2441
||||||||||
Sbjct: 1024 aacgaatttt 1033
>BF01010B1C12
Length = 331
Score = 248 bits (125), Expect = 4e-65
Identities = 128/129 (99%)
Strand = Plus / Minus
Query: 2438 ttttatttttatatgatgctgggttatcttgacgcgtcgcaagagaaactttaagcttga 2497
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttttttttatatgatgctgggttatcttgacgcgtcgcaagagaaactttaagcttga 266
Query: 2498 ttgattggatatttttttataaaaattattaataagtgcaatattgatgtatcaattgtt 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgattggatatttttttataaaaattattaataagtgcaatattgatgtatcaattgtt 206
Query: 2558 ttatataat 2566
|||||||||
Sbjct: 205 ttatataat 197
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,324
Number of extensions: 7082
Number of successful extensions: 7082
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7082
Number of HSP's successfully gapped: 2
Length of query: 2566
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2549
Effective length of database: 8,119,229
Effective search space: 20695914721
Effective search space used: 20695914721
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)