BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18160 (UTR included)
(980 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_431_C1 178 1e-44
>BF14_431_C1
Length = 1461
Score = 178 bits (90), Expect = 1e-44
Identities = 251/302 (83%), Gaps = 2/302 (0%)
Strand = Plus / Plus
Query: 7 tttttattgtccaataatattgaatac-ctcttcgaatccaaacgttcaataatatttag 65
|||||||||| |||||||||||||||| ||||| ||||||||||||||| |||| ||||
Sbjct: 821 tttttattgtgcaataatattgaatactctctttgaatccaaacgttcagtaatgtttac 880
Query: 66 caatgagattgacaaatcattcccgcgactgaaccgatcacaaccgctctgaacagtgga 125
| || |||||| |||| ||||| || ||||||||| ||||| ||||||| ||||||| |
Sbjct: 881 cgataagattgtcaaaccattcacgtgactgaacccatcacgaccgctcaaaacagtgaa 940
Query: 126 ctgaagaaatatcgaccaacgctaactctacacactacaa-aaatgaatattgcgagata 184
||||| | |||| | ||| | ||||||||||| ||||| |||| |||||| |||
Sbjct: 941 ctgaaaagatattgcgcaataccaactctacacagtacaagaaatacttattgcccaata 1000
Query: 185 aaatttaagcccgctcaaacttctgttcaatcattacgcaatttttcaatattattccta 244
|| || ||| ||||| |||||||||||| ||||| ||||||| |||||||| || ||||
Sbjct: 1001 aagttcgagctcgctcgaacttctgttcagtcattgcgcaattcttcaatatcatcccta 1060
Query: 245 cactgctgatagtattgtacaatcgactgtattgtgcaatattattgtagatgtatgggc 304
||||||| ||| |||||||||| | || ||||| ||||||| |||||||||||||||||
Sbjct: 1061 cactgctaataatattgtacaaccagctatattgcgcaatataattgtagatgtatgggc 1120
Query: 305 cg 306
||
Sbjct: 1121 cg 1122
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 103,708
Number of extensions: 2190
Number of successful extensions: 2190
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2189
Number of HSP's successfully gapped: 2
Length of query: 980
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 963
Effective length of database: 8,119,229
Effective search space: 7818817527
Effective search space used: 7818817527
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)