BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13021 (UTR included)
(4534 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3090_C1 2204 0.0
>BF14_3090_C1
Length = 1260
Score = 2204 bits (1112), Expect = 0.0
Identities = 1220/1256 (97%), Gaps = 15/1256 (1%)
Strand = Plus / Plus
Query: 3284 ggccttcctgtactattatgactccaatctaactgacttccagttcctgtatatagatgt 3343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccttcctgtactattatgactccaatctaactgacttccagttcctgtatatagatgt 60
Query: 3344 cgctttaatagttaacttcgctttcttcttcggcatgaccgaggcttacaccggcgagct 3403
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctttaatagttaacttcgcgttcttcttcggcatgaccgaggcttacaccggcgagct 120
Query: 3404 gtgcaagctgccgcctctgacgtcacttctcggtatcgtccctctgtcgtctctggtcgg 3463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgcaagctgccgcctctgacgtcacttctcggtatcgtccctctgtcgtctctggtcgg 180
Query: 3464 tcagctagcactgatagccgtcgctcaatacttgagtttcctagccctgacgtacttccc 3523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagctagcactgatagccgtcgctcaatacttgagtttcctagccctgacgtacttccc 240
Query: 3524 atggtacgtgcgtcatacctatgaaggcgctgaggccaacgagtgttgggaaaactacgc 3583
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggtacgtccgtcatacctatgaaggcgctgaggccaacgagtgttgggaaaactacgc 300
Query: 3584 aattttcactgtatctatgttccaatatataacaatggcggtcgtgttcagtcacggcgc 3643
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 aattttcactgtatctatgttccaatatataacaatggcggtcgtgttcagtcacggctc 360
Query: 3644 tccgtacaggaggtcggtgataacgaacaccaagctgatgataagtgttttagtgatgac 3703
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 cccgtacaggaggtcggtgataacgaacaccaagctcatgataagtgttttagtgatgac 420
Query: 3704 ctccctctgtgtatacgtaaccctctcaccagcggagtggttagccaaatttctccaact 3763
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 ctccctctgtgtttacgtaaccctctcaccggcggagtggttagccaaatttctccaact 480
Query: 3764 cagaatgcccaaggacgttttaatgtcatacatagtcctggctcttgcgtcgttcaattt 3823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagaatgcccaaggacgttttaatgtcatacatagtcctggctcttgcgtcgttcaattt 540
Query: 3824 cgtgatagcgttgttcttcgagaggatcgtcatacagcattttatggagaatatgaggaa 3883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgtgatagcgttgttcttcgagaggatcgtcatacagcattttatggagaatatgaggaa 600
Query: 3884 gataccaacgttcattaaggagaggcaggtgatgaaaactcctcacctgatgatgaagcg 3943
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 gataccaacgttcattaaggagaggcaggcgatgaaaactcctcacctgatgatgaagcg 660
Query: 3944 acagctgagtgacatggactacctcacgtgcgagagtattttgaaatttgattccgagac 4003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acagctgagtgacatggactacctcacgtgcgagagtattttgaaatttgattccgagac 720
Query: 4004 caaggaatctatattcgactcggattcctgacggattattgagttattggattaaaagaa 4063
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 721 caaggaatctatattcgactcggattcctgacggattattgagttattagattaaaagaa 780
Query: 4064 atcggttattcctcttagttataaaaaaatatcttatgcttagtgatatgttttttatgc 4123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 781 atcggttattcctcttagttataaaaaaatatcttatgcttagtgatatgtttttcatgc 840
Query: 4124 aatgaccaaataacttaaaaaaattaaaatctataaccgtattatggtttcagtactgac 4183
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 841 aatgaccaaataacttaaaaaaattaaaatctgtaagcgtattatggtttcagtactgac 900
Query: 4184 attaattttatgtacgctttttgacatattcttttaaaccctaaccaatttgatatttta 4243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 attaattttatgtatgctttttgacatattcttttaaaccctaaccaatttgatatttta 960
Query: 4244 atctatatctctcattaaggtttgtttgattgtgacagaaataaaatattatataatagt 4303
| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aactatttgtctcattaaggtttgtttgattgtgacagaaataaaatattatataatagt 1020
Query: 4304 tactaggcattagtatgagttgtcaccgttaacttaaaagcttacagtaacaaagttacg 4363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tactaggcattagtgtgagttgtcaccgttaacttaaaagcttacagtaacaaagttacg 1080
Query: 4364 tacttataagttggtgatgcaga------ttaaggaaacggttagctttaacgttaatga 4417
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1081 tacttataagttggtgatgcagactcgggttaaggaaacggttagctttaacgttaatga 1140
Query: 4418 ctatataagaattaatataaaaataaattacagagtattcataatggctggaaaatttat 4477
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctatttaagaatgaatataaaaataaattacagagtattcataatggctggaaaatttat 1200
Query: 4478 atacaaaagagatttatatacaaatagattttatttaaacagtatttaaatcatac 4533
|||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1201 atacaaaa------tat---taaatagattttatttaaacagtatttaaatcatac 1247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 460,850
Number of extensions: 8855
Number of successful extensions: 8855
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8855
Number of HSP's successfully gapped: 3
Length of query: 4534
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4516
Effective length of database: 8,109,745
Effective search space: 36623608420
Effective search space used: 36623608420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)