BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21636 (UTR included)
(3328 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_792_C1 1140 0.0
>BF14_792_C1
Length = 1353
Score = 1140 bits (575), Expect = 0.0
Identities = 600/606 (99%), Gaps = 3/606 (0%)
Strand = Plus / Plus
Query: 2724 agctcctcgaaattcgtgtcgcaaattaaaaactccttaaaagacattcacgacctctac 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agctcctcgaaattcgtgtcgcaaattaaaaactccttaaaagacattcacgacctctac 241
Query: 2784 gtcgaatacaacaaactacagaatggactaaagaagagtaaataacggttttatgtttag 2843
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 gtcgaatacaacaaactacagaatggactaaagaagagtaaataacgcttttatgtttag 301
Query: 2844 tgtcttagataagtattgtgcagttttactttacaacgcgagttatcaatgcaatgccgc 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtcttagataagtattgtgcagttttactttacaacgcgagttatcaatgcaatgccgc 361
Query: 2904 tttaaataggtttcttctagttgtttgctgtatatttttttcatcgtattgtttgtactc 2963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttaaataggtttcttctagttgtttgctgtatatttttttcatcgtattgtttgtactc 421
Query: 2964 gaatagattaagagtttatatcgtgcgaaca-ttatgttgcttctagaaagtcgactcta 3022
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 gaatagattaagagtttatatcgtgcgaacatttatgttgcttctagaaagtcgactcta 481
Query: 3023 aagcttgtggatattgttcatatttgagacgtaagtttacgatcactcatacgaaacggt 3082
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagcttgttgatattgttcatatttgagacgtaagtttacgatcactcatacgaaacggt 541
Query: 3083 acacacacacacacacacacacgcgcgcgcgttcattcattcatacataacaacacatag 3142
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 542 acacacacacacacacacaca--cgcgcgcgttcattcattcatacataacaacacatag 599
Query: 3143 cggtattaatagacttacacacaagtgatttacaacttgtatagagttgtatatttttga 3202
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 600 cggtattaatagacttacacacaagtgatttacaactcgtatagagttgtatatttttga 659
Query: 3203 tatgttttattcatgtatgtgaagacacacactcacacacacgcatcacagacgcatcgc 3262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tatgttttattcatgtatgtgaagacacacactcacacacacgcatcacagacgcatcgc 719
Query: 3263 cagtgtaccgcggtggtcgaagctgaacaaagcgtctccgggtcggtgtattgcttttaa 3322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cagtgtaccgcggtggtcgaagctgaacaaagcgtctccgggtcggtgtattgcttttaa 779
Query: 3323 aatgca 3328
||||||
Sbjct: 780 aatgca 785
Score = 174 bits (88), Expect = 6e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 2636 ggacgacgggtacggcgtgtcctacatcatcgccggcgaagacacgctgttcttccacgt 2695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacgacgggtacggcgtgtcctacatcatcgccggcgaagacacgctgttcttccacgt 60
Query: 2696 gtccagcaagaagagttgccccctcacc 2723
||||||||||||||||||||||||||||
Sbjct: 61 gtccagcaagaagagttgccccctcacc 88
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,978
Number of extensions: 6077
Number of successful extensions: 6077
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6064
Number of HSP's successfully gapped: 2
Length of query: 3328
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3310
Effective length of database: 8,109,745
Effective search space: 26843255950
Effective search space used: 26843255950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)