BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17950 (UTR included)
(3442 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2H09 545 e-154
>BF01024A2H09
Length = 521
Score = 545 bits (275), Expect = e-154
Identities = 314/327 (96%)
Strand = Plus / Minus
Query: 3116 tttttttttttaataattaattaaacagtatttaaaaaattctaaatgagctgccaaagt 3175
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 489 ttttttttttttttaattaattaaccagtatttaaaaaattctaaatgagctgccaaagt 430
Query: 3176 attagtgttttagagttagtaatcagtctgtggactttgccccgttaattccaaaaaact 3235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 attagtgttttagagttagtaatcagtctgtggactttgccccgttaattccaaaaaact 370
Query: 3236 tgtatggatttttcaccattcccacgaagtatcataaaaatattggatttatttaactaa 3295
||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 369 tgtatggatttttgaccattcccccgaagtttcataaaaatattggatttatttaactaa 310
Query: 3296 ttttaaatcactcttcacacgaaaacaatgattgaaaattttaaatattatacaaataat 3355
||||||||| | |||| | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 309 ttttaaatcccccttcccccgaaaacaatgattgaaaattttaaattttatacaaataat 250
Query: 3356 agaccataaaatattttatgaactaactataactctggcctcatgtatattacgaatata 3415
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 249 agcccataaaatattttatgaacaaactataactctggcctcatgtatattacgaatata 190
Query: 3416 taaaaagacgtgatgaaaaatttatgt 3442
|||||||||||||||||||||||||||
Sbjct: 189 taaaaagacgtgatgaaaaatttatgt 163
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 440,458
Number of extensions: 11833
Number of successful extensions: 11833
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11832
Number of HSP's successfully gapped: 1
Length of query: 3442
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3424
Effective length of database: 8,109,745
Effective search space: 27767766880
Effective search space used: 27767766880
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)