BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14344 (UTR included)
(2185 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2896_C1 1608 0.0
>BF14_2896_C1
Length = 832
Score = 1608 bits (811), Expect = 0.0
Identities = 825/831 (99%)
Strand = Plus / Plus
Query: 457 ttcggtattgtgttaaattatataacgaaaataaaataataataatggataagataattt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttcggtattgtgttaaattatataacgaaaataaaataataataatggataagataattt 61
Query: 517 tagccatcccactgactatcgttataattgccacagtttattccgatataattgaagctc 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagccatcccactgactatcgttataattgccacagtttattccgatataattgaagctc 121
Query: 577 caaaccaatactgtaagacaaaatttacaaatggtacatgtgtgaaagtaaccgattgcc 636
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caagccaatactgtaagacaaaatttacaaatggtacatgtgtgaaagtaaccgattgcc 181
Query: 637 cctatgcgttgacattgatatataaacatgattatgatacactatcaaatctcacttgtg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctatgcgttgacattgatatataaacatgattatgatacactatcaaatctcacttgtg 241
Query: 697 gattcaataagcaccaacctcaggtatgttgtccccaacaagactttcctatattgtacg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gattcaataagcaccaacctcaggtatgttgtccccaacaagactttcctatattgtacg 301
Query: 757 atacaaaagaggaaccggctacaaatagaccgaaaccaatgaatttaaaaccggtagcca 816
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atacaaaagaggaaccagctacaaatagaccgaaaccaatgaatttaaaaccggtagcca 361
Query: 817 caacaacttttagcccccacatagaaacgaagaatgatagctctaatgtgttaccaaaca 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caacaacttttagcccccacatagaaacgaagaatgatagctctaatgtgttaccaaaca 421
Query: 877 aaacaatttgtggcaaagtaaaaaataagggcgtcagtgatagaatcgttggtggatctg 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaacaatttgtggcaaagtaaaaaataagggcgtcagtgatagaatcgttggtggatctg 481
Query: 937 ttgttgaagttgatgaacatccttggttagctcgtatacaacataaattcgatgacaata 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgttgaagttgatgaacatccttggttagctcgtatacaacataaattcgatgacaata 541
Query: 997 ctattttcggatgttcagctgcacttatcactaatttatatcttcttacggcagcacatt 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctattttcggatgttcagctgcacttatcactaatttatatcttcttacggcagcacatt 601
Query: 1057 gcgtgcaaaatcacaaaattattccgttcagtgttcgtttgggagagtggaacaccaaga 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcgtgcaaaatcacaaaattattccgttcagtgttcgtttgggagagtggaacaccaaga 661
Query: 1117 cagacattgactgtcgcaacaacatttgtaataacagtacagttgacataaacattaata 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagacattgactgtcgcaacaacatttgtaataacagtacagttgacataaacattaata 721
Query: 1177 aaataattgtccatccaaaatatgatggaaaattaggtcataacagcgacatcgccttga 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaataattgtccatccaaaatatgatggaaaattaggtcataacagcgacatcgccttga 781
Query: 1237 ttcgtttaagagatcccgtgaattttacagatttcatacagcccatatgtt 1287
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttcgtttannnnatcccgtgaattttacagatttcatacagcccatatgtt 832
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,256
Number of extensions: 12403
Number of successful extensions: 12403
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12403
Number of HSP's successfully gapped: 1
Length of query: 2185
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2168
Effective length of database: 8,119,229
Effective search space: 17602488472
Effective search space used: 17602488472
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)