BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21576 (UTR included)
(1510 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1309_C1 2478 0.0
>BF14_1309_C1
Length = 1272
Score = 2478 bits (1250), Expect = 0.0
Identities = 1256/1259 (99%)
Strand = Plus / Plus
Query: 252 ttaaacgattacaaagactagtagtcacttgtgaaaagtaccgatgacaaagtagcttca 311
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1 ttaaacgattacaaagactagtagtcantnntgaaaagtaccgatgacaaagtagcttca 60
Query: 312 tttattacttttgtgatttactgtcacagtataactgcttctagagtttgttttctctgt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttattacttttgtgatttactgtcacagtataactgcttctagagtttgttttctctgt 120
Query: 372 tatctgtactccaaataagtttgggacttattatcgttagtcaataaatgctagctgtaa 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatctgtactccaaataagtttgggacttattatcgttagtcaataaatgctagctgtaa 180
Query: 432 gctagattgttgcactcaaacgttaccttaagcttcgacctggcgtgccaggtgtcagca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctagattgttgcactcaaacgttaccttaagcttcgacctggcgtgccaggtgtcagca 240
Query: 492 gcacagatgatggctggatcggccctacggcgtcttatggccgagtacaaacaactaaca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcacagatgatggctggatcggccctacggcgtcttatggccgagtacaaacaactaaca 300
Query: 552 ctaaaccctcccgaaggaatcattgctggacctgttaatgaagaaaacttttttgaatgg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaaaccctcccgaaggaatcattgctggacctgttaatgaagaaaacttttttgaatgg 360
Query: 612 gaggctcttataacaggtccagagggaacatgcttcgagggtggcatatttcccgccaag 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggctcttataacaggtccagagggaacatgcttcgagggtggcatatttcccgccaag 420
Query: 672 ctcgttttccccccggactacccactaagtccacccaaaatgcaatttatttgtgaaatg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcgttttccccccggactacccactaagtccacccaaaatgcaatttatttgtgaaatg 480
Query: 732 tttcatccaaatatatatgcggatgggcgagtgtgcatatcaattctccatgctccggga 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttcatccaaatatatatgcggatgggcgagtgtgcatatcaattctccatgctccggga 540
Query: 792 gatgatcctatgggctatgagagcagtgccgagcgttggtccccagtccagagtgtggaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatgatcctatgggctatgagagcagtgccgagcgttggtccccagtccagagtgtggaa 600
Query: 852 aaaatactgttatcagtggtcagcatgcttgctgaaccaaatgacgagagtggagccaat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaatactgttatcagtggtcagcatgcttgctgaaccaaatgacgagagtggagccaat 660
Query: 912 gtcgatgcggcaaagatgtggcgagaggacagagaacaattcaacaaaatagcagagcgt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcgatgcggcaaagatgtggcgagaggacagagaacaattcaacaaaatagcagagcgt 720
Query: 972 cttgttcgcaaaacattgggtctgcctccacccgaatagcaggaggtgttcgccctttcc 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttgttcgcaaaacattgggtctgcctccacccgaatagcaggaggtgttcgccctttcc 780
Query: 1032 caacctgacgaaacgcgacccacggctctccccttaccctcccccgcgccgcactcgtct 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caacctgacgaaacgcgacccacggctctccccttaccctcccccgcgccgcactcgtct 840
Query: 1092 cgtacgcccggagctcgtggcaggaggtcgcgtcgtcagctgtatccgcgacacaacagg 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgtacgcccggagctcgtggcaggaggtcgcgtcgtcagctgtatccgcgacacaacagg 900
Query: 1152 ttctaaacaacgacgtgcactgacattctatacatactaggcacgaataccgattaaagc 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttctaaacaacgacgtgcactgacattctatacatactaggcacgaataccgattaaagc 960
Query: 1212 acaaacttttgacatactattaagagcatataatttctcttaatattacctttttcctgt 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acaaacttttgacatactattaagagcatataatttctcttaatattacctttttcctgt 1020
Query: 1272 acgatttataaaattaccgaatttttgacaacttgtagctggttttaaatacgtagttat 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acgatttataaaattaccgaatttttgacaacttgtagctggttttaaatacgtagttat 1080
Query: 1332 tatgggcaataatatatcgtaggttactcgataatgctgttgcagttattatagtataat 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tatgggcaataatatatcgtaggttactcgataatgctgttgcagttattatagtataat 1140
Query: 1392 ggttttggacttttacctatattaagtataacttagctgtatctgtaactgaatagtatc 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggttttggacttttacctatattaagtataacttagctgtatctgtaactgaatagtatc 1200
Query: 1452 gaacgccgatcgttaaacaattcaaatttcatattaatactatttaataatttaatatt 1510
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gaacgccgatcgttaaacaattcaaatttcatattaatactatttaataatttaatatt 1259
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 179,373
Number of extensions: 3437
Number of successful extensions: 3437
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3437
Number of HSP's successfully gapped: 1
Length of query: 1510
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1493
Effective length of database: 8,119,229
Effective search space: 12122008897
Effective search space used: 12122008897
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)