BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20083 (UTR included)
(2911 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1987_C1 1489 0.0
BF01042A2A09 1338 0.0
BF01049B1C08 1199 0.0
>BF14_1987_C1
Length = 793
Score = 1489 bits (751), Expect = 0.0
Identities = 782/793 (98%)
Strand = Plus / Plus
Query: 1262 cgggaacagtcttctgggaaagaaatgtttcgccttaagactcggctcggtgctggcgcg 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgggaacagtcttctgggaaagaaatgtttcgccttaagactcggctcggtgctggcgcg 60
Query: 1322 gcgtgaggggtggctggcggaacacatgctgatcgtgggtataacggaccccaagggccg 1381
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 gcgtgaggggtggctggcggaacacatgctgatcgtgggtataacggaccccaaaggccg 120
Query: 1382 taagcgctacatcgccgcggccttcccgtcggcgtgcggcaagactaacctggccatgat 1441
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 121 taagcgctacatcgccgcggccttcccgtcggcctgcggcaagactaacctggctatgat 180
Query: 1442 gaccccgaccctgccagggtacaaggtggagtgtgtgggagacgacatcgcctggatgaa 1501
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaccccgaccctgccaggatacaaggtggagtgtgtgggagacgacatcgcctggatgaa 240
Query: 1502 gtttgacagcagcggcgtgctgagagccatcaaccctgagaacgggttctttggcgtcgc 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttgacagcagcggcgtgctgagagccatcaaccctgagaacgggttctttggcgtcgc 300
Query: 1562 tccaggaacctcctcatcgaccaaccccatagccatggagtctatcttccgcgacacggt 1621
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accaggaacctcctcatcgaccaaccccatagccatggagtctatcttccgcgacacggt 360
Query: 1622 gttcacgaacgtggctgagacagccgatggtggggtttggtgggagggcatgggagaggc 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcacgaacgtggctgagacagccgatggtggggtttggtgggagggcatgggagaggc 420
Query: 1682 cccggaagctctgatcgactggaaaggccagccgtgggatcccagcaaggacacgccagc 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccggaagctctgatcgactggaaaggccagccgtgggatcccagcaaggacacgccagc 480
Query: 1742 agcacatcccaactccaggttctgcacgccggcgtctcagtgtcccatcatggacggatg 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcacatcccaactccaggttctgcacgccggcgtctcagtgtcccatcatggacggatg 540
Query: 1802 ttgggagtgtgcggcgggggtgccgatatccgcgatcctcctggggggtcggcggccggc 1861
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 541 ttgggagagtgcggcgggggtgccgatatccgcgatcctcctcgggggtcggcggccggc 600
Query: 1862 cggcgtcccgctggtggtggaggccagggactggcgacacggagtattcatgggagccag 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggcgtcccgctggtggtggaggccagggactggcgacacggagtattcatgggagccag 660
Query: 1922 catgcgctcccaagcgaccgctgccgccgagcacgcgggcaaagtagtgatgcacgatcc 1981
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 661 catgcgctcccaagcgaccgctgcagccgagcacgcgggcaaagtcgtgatgcacgatcc 720
Query: 1982 gttcgcgatgcggcccttcttcggctacaacttcggagactacctccgtcactggttgtc 2041
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 721 gttcgcgatgcggcccttcttcggctacaacttcggnnactacctccgtcactggttgtc 780
Query: 2042 catgccgcagcca 2054
|||||||||||||
Sbjct: 781 catgccgcagcca 793
>BF01042A2A09
Length = 695
Score = 1338 bits (675), Expect = 0.0
Identities = 690/695 (99%)
Strand = Plus / Plus
Query: 474 cgtctcatttgaaaaagaaacgttaaaatggtgctgttgttgcggaggttgtcgaaaaaa 533
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtctcacttgaaaaagaaacgttaaaatggtgctgttgttgcggaggttgtcgaaaaaa 60
Query: 534 tgtgctcaggtcgcgttatcctgcagcagagcgtctcaccaggccgccttacggggcgcc 593
|||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 61 tgtgctcaggtcgcgttatcctgcagtagagcatctcaccaggccgccttacgaggcgcc 120
Query: 594 ctcaagctaaatccgcaattagcgaatttgacccccaaggtccgtgcgtttgtggaacga 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaagctaaatccgcaattagcgaatttgacccccaaggtccgtgcgtttgtggaacga 180
Query: 654 agtgcggcgttgtgtgaaccggatcacgtccacgtgtgtgacggttccgacgccgagggt 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtgcggcgttgtgtgaaccggatcacgtccacgtgtgtgacggttccgacgccgagggt 240
Query: 714 aaggcgctccttcagatgatgcagcagcaggggactgtgaaacccctgcctaaatacgac 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggcgctccttcagatgatgcagcagcaggggactgtgaaacccctgcctaaatacgac 300
Query: 774 aactgctggttgtcacgaacggatcccgcggacgtggcgcgcgtcgagtctcgcactttc 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgctggttgtcacgaacggatcccgcggacgtggcgcgcgtcgagtctcgcactttc 360
Query: 834 atttgctctgaacgagaaagagacgtggtccctgtagcgagggcggggcagaagtccgcg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttgctctgaacgagaaagagacgtggtccctgtagcgagggcggggcagaagtccgcg 420
Query: 894 ctggggaactacatcagccccgagggttacgacaaggctgtgactgaacggttcccgggc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctggggaactacatcagccccgagggttacgacaaggctgtgactgaacggttcccgggc 480
Query: 954 tgtatgcgaggcaggaccatgtatgtgataccgttctctatggggcccgtcggatctcct 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtatgcgaggcaggaccatgtatgtgataccgttctctatggggcccgtcggatctcct 540
Query: 1014 ttgtccaagatcggtgtggaagtcaccgattccccttatgtcgtgtactctatgagggtc 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtccaagatcggtgtggaagtcaccgattccccttatgtcgtgtactctatgagggtc 600
Query: 1074 atgaccagaatgggtaataaagtcttagaggctctgcgtaaggacgagcagttcgtccgt 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgaccagaatgggtaataaagtcttagaggctctgcgtaaggacgagcagttcgtccgt 660
Query: 1134 tgtttgcacgcggtaggtcgtcgtgatgacggaca 1168
||||||||||||||||||||||||||||| |||||
Sbjct: 661 tgtttgcacgcggtaggtcgtcgtgatgatggaca 695
>BF01049B1C08
Length = 813
Score = 1199 bits (605), Expect = 0.0
Identities = 611/614 (99%)
Strand = Plus / Plus
Query: 530 aaaatgtgctcaggtcgcgttatcctgcagcagagcgtctcaccaggccgccttacgggg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaaatgtgctcaggtcgcgttatcctgcagcagagcgtctcaccaggccgccttacgggg 259
Query: 590 cgccctcaagctaaatccgcaattagcgaatttgacccccaaggtccgtgcgtttgtgga 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cgccctcaagctaaatccgcaattagcgaatttgacccccaaggtccgtgcgtttgtgga 319
Query: 650 acgaagtgcggcgttgtgtgaaccggatcacgtccacgtgtgtgacggttccgacgccga 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acgaagtgcggcgttgtgtgaaccggatcacgtccacgtgtgtgacggttccgacgccga 379
Query: 710 gggtaaggcgctccttcagatgatgcagcagcaggggactgtgaaacccctgcctaaata 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggtaaggcgctccttcagatgatgcagcagcaggggactgtgaaacccctgcctaaata 439
Query: 770 cgacaactgctggttgtcacgaacggatcccgcggacgtggcgcgcgtcgagtctcgcac 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgacaactgctggttgtcacgaacggatcccgcggacgtggcgcgcgtcgagtctcgcac 499
Query: 830 tttcatttgctctgaacgagaaagagacgtggtccctgtagcgagggcggggcagaagtc 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttcatttgctctgaacgagaaagagacgtggtccctgtagcgagggcggggcagaagtc 559
Query: 890 cgcgctggggaactacatcagccccgagggttacgacaaggctgtgactgaacggttccc 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cgcgctggggaactacatcagccccgagggttacgacaaggctgtgactgaacggttccc 619
Query: 950 gggctgtatgcgaggcaggaccatgtatgtgataccgttctctatggggcccgtcggatc 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggctgtatgcgaggcaggaccatgtatgtgataccgttctctatggggcccgtcggatc 679
Query: 1010 tcctttgtccaagatcggtgtggaagtcaccgattccccttatgtcgtgtactctatgag 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcctttgtccaagatcggtgtggaagtcaccgattccccttatgtcgtgtactctatgag 739
Query: 1070 ggtcatgaccagaatgggtaataaagtcttagaggctctgcgtaaggacgagcagttcgt 1129
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 ggtcatgaccagaatgggtaataaagtcttagnnnctctgcgtaaggacgagcagttcgt 799
Query: 1130 ccgttgtttgcacg 1143
||||||||||||||
Sbjct: 800 ccgttgtttgcacg 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,628
Number of extensions: 5346
Number of successful extensions: 5346
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5346
Number of HSP's successfully gapped: 3
Length of query: 2911
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2893
Effective length of database: 8,109,745
Effective search space: 23461492285
Effective search space used: 23461492285
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)