BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10492 (UTR included)
(1450 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1B11 1191 0.0
>BF01058B1B11
Length = 639
Score = 1191 bits (601), Expect = 0.0
Identities = 604/605 (99%)
Strand = Plus / Plus
Query: 455 gaagctgtgaagtgaattgtcttatttatataactttataataaacatgatgtcgttgaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaagctgtgaagtgaattgtcttatttatataactttataataaacatgatgtcgttgaa 71
Query: 515 gtatctgtttgtgtttggtgtgttggctgttagcctcaggagtgcgcgggccataagtga 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gtatctgtttgtgtttggtgtgttggctgttagcctcaggagtgcgcgggccataagtga 131
Query: 575 tgaagacaggaacaagatccacacggcagttctgcctcatgtagctgaatgcagcgcaaa 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tgaagacaggaacaagatccacacggcagttctgcctcatgtagctgaatgcagcgcaaa 191
Query: 635 cttcggtgttactgaggatgacattaaggcagcgaaggaagctggtacattaggcacctt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cttcggtgttactgaggatgacattaaggcagcgaaggaagctggtacattaggcacctt 251
Query: 695 caacccctgtctaatgggatgtgttcttaaaaaaatccaagtaattgacgacaaaggttt 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caacccctgtctaatgggatgtgttcttaaaaaaatccaagtaattgacgacaaaggttt 311
Query: 755 atttgatgctgataaagctgtggagttatccaacaagtatttctctgatgaggctgacaa 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atttgatgctgataaagctgtggagttatccaacaagtatttctctgatgaggctgacaa 371
Query: 815 gaagaaagctgaggaaataatcacaacatgcaaagcagtaaacgacaaggaagtaggtga 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaagaaagctgaggaaataatcacaacatgcaaagcagtaaacgacaaggaagtaggtga 431
Query: 875 tggcgaaaaaggttgtgaaagagccggattgctcttccaatgtttccttccttttaaaga 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tggcgaaaaaggttgtgaaagagccggattgctcttccaatgtttccttccttttaaaga 491
Query: 935 tgcgttcatcaattagatagctgctgtctaagctcgtgatatcatcggattctacaatat 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgcgttcatcaattagatagctgctgtctaagctcgtgatatcatcggattctacaatat 551
Query: 995 tcctagcacatttgttctatatatattttgttgcaatttaaaaaaataaaataattgaat 1054
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 552 tcctagcacatttgttctatatatattttgttgcaatttaaaaaaataaaataattaaat 611
Query: 1055 tttaa 1059
|||||
Sbjct: 612 tttaa 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,425
Number of extensions: 7164
Number of successful extensions: 7164
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7164
Number of HSP's successfully gapped: 1
Length of query: 1450
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1433
Effective length of database: 8,119,229
Effective search space: 11634855157
Effective search space used: 11634855157
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)