BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00212 (UTR included)
(2638 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01002X1C12 811 0.0
BF01026A1C09 757 0.0
>BF01002X1C12
Length = 452
Score = 811 bits (409), Expect = 0.0
Identities = 415/417 (99%)
Strand = Plus / Plus
Query: 1878 cacggtccgttgtcggtgtccatcgacgctacagacatgcttacttattacaacggcggt 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 cacggtccgttgtcggtgtccatcgacgctacagacatgcttacttattacaacggcggt 74
Query: 1938 atctactccgatagtgactgcagtactacaaatttaaaccatgaagtaactctcgtcggc 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atctactccgatagtgactgcagtactacaaatttaaaccatgaagtaactctcgtcggc 134
Query: 1998 tacggtgaattggacggtgaagagtattggatagtgaaaaattcttggggtagggattgg 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tacggtgaattggacggtgaagagtattggatagtgaaaaattcttggggtagggattgg 194
Query: 2058 ggtgttgacggctatttccatatcacaacccgggataacagctgcgggatcaccactgaa 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggtgttgacggctatttccatatcacaacccgggataacagctgcgggatcaccactgaa 254
Query: 2118 cctacttatgtagttttctaaacgatgccacgtctgattataattttaaaaagaccatga 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cctacttatgtagttttctaaacgatgccacgtctgattataattttaaaaagaccatga 314
Query: 2178 taaataatgatgaccatgattagatgctttgattttaaaatacttatatatgtctagcat 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taaataatgatgaccatgattagatgctttgattttaaaatacttatatatgtctagcat 374
Query: 2238 aggattgcacgttacttgataggaatttttacgctaataataaaatgttattatcaa 2294
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 375 aggattgcacgttacttgataggaatttctacgctactaataaaatgttattatcaa 431
>BF01026A1C09
Length = 770
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Plus
Query: 517 taaaaatttttccgttactcattgttgcatcggttgctgggaaaaatgttcttgaagatg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaaatttttccgttactcattgttgcatcggttgctgggaaaaatgttcttgaagatg 60
Query: 577 accttccaaaactgaaatggcccaaaaagtattcgttcgaagccgaatctctgtcactga 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accttccaaaactgaaatggcccaaaaagtattcgttcgaagccgaatctctgtcactga 120
Query: 637 cgtcaggtttggttcaagatgtcacctactggcgagtcagcaaaaaatcgagggtagatt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtcaggtttggttcaagatgtcacctactggcgagtcagcaaaaaatcgagggtagatt 180
Query: 697 ttaacaaaggtgccgtaaaactgatatcaattaagggccagaggaagtcaaaatttcctt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaacaaaggtgccgtaaaactgatatcaattaagggccagaggaagtcaaaatttcctt 240
Query: 757 tcggtgtaaaatatgagattcatcccgaaagtaatgaagaatatgagaacaaattcatct 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggtgtaaaatatgagattcatcccgaaagtaatgaagaatatgagaacaaattcatct 300
Query: 817 gcacgggaatgaaaggaaacatcttcagacaagccaaactggataaggttttgccagatg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcacgggaatgaaaggaaacatcttcagacaagccaaactggataaggttttgccagatg 360
Query: 877 ttgacgattttgtccacattgg 898
||||||||||||||||||||||
Sbjct: 361 ttgacgattttgtccacattgg 382
Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Plus
Query: 897 gggaaggagaaacttgaattaggtgaggtggaaaagtttacattctttgaagacaaagat 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gggaaggagaaacttgaattaggtgaggtggaaaagtttacattctttgaagacaaagat 613
Query: 957 tatattaactctcaaacgaggcagaatttatgggtgttacaaaatgattcaacatttata 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tatattaactctcaaacgaggcagaatttatgggtgttacaaaatgattcaacatttata 673
Query: 1017 cccgttagatatgagaagataatatataatacttggattaaaaatgtgaaagatcacaca 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cccgttagatatgagaagataatatataatacttggattaaaaatgtgaaagatcacaca 733
Query: 1077 atttggaacatcttcaacttcaaaaccgatttcagcg 1113
|||||||||||||||||||||||||||||||||||||
Sbjct: 734 atttggaacatcttcaacttcaaaaccgatttcagcg 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,010
Number of extensions: 7138
Number of successful extensions: 7138
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7138
Number of HSP's successfully gapped: 3
Length of query: 2638
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2621
Effective length of database: 8,119,229
Effective search space: 21280499209
Effective search space used: 21280499209
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)