BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14098 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1D08 1296 0.0
>BF01055B1D08
Length = 701
Score = 1296 bits (654), Expect = 0.0
Identities = 672/677 (99%), Gaps = 2/677 (0%)
Strand = Plus / Plus
Query: 337 ttacatagaatcgcagattgtgctcgatttaataatgattattataaaatgaaaacagcg 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttacatagaatcgcagattgtgctcgatttaataatgattattataaaatgaaaacagcg 60
Query: 397 gccctcttaatcacaacaactgcgcttgaatgagcgt--aattagttttaaattattttg 454
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 61 gccctcttaatcacaacaactgcgcttgaatgagcgttaaatgagttttaaattattttg 120
Query: 455 ttttatttttttatgggaacatctcttgtgaaaaatcaatatcaccatggacacaactgg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttatttttttatgggaacatctcttgtgaaaaatcaatatcaccatggacacaactgg 180
Query: 515 atcgataaacaatgaagattataatatagagagtattgagcaagaagatgatggtgatta 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcgataaacaatgaagattataatatagagagtattgagcaagaagatgatggtgatta 240
Query: 575 ttccgaagaacgggagctggtgaatgactcgtgttcgacgaaggttttggacccgtcaga 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttccgaagaacgggagctggtgaatgactcgtgttcgacgaaggttttggacccgtcaga 300
Query: 635 ggagccccgcgaccgctactgtctcgtttacattttgttttatttatttgggatcacttc 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagccccgcgaccgctactgtctcgtttacattttgttttatttatttgggatcacttc 360
Query: 695 gcttgtttcctggaatttcattataacagccaatgattattggatgtacaagttccgcga 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 gcttgtttcctggaatttcattataacagccaatgattattggatgtacaagttccgaga 420
Query: 755 tgtcacaccaagcaacctcacattctacgtccgtaagacacagttccaggctgagttcac 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtcacaccaagcaacctcacattctacgtccgtaagacacagttccaggctgagttcac 480
Query: 815 atcctacctcaatgtgggcactgctatacccaacctgatattcctcatgctcaactcgtt 874
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcctacctcaatgtgggcaccgctatacccaacctgatattcctcatgctcaactcgtt 540
Query: 875 ttatggccatctggtatccgtgaaggcgaggctgcaagggtctctgttggttgtgacgct 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttatggccatctggtatccgtgaaggcgaggctgcaagggtctctgttggttgtgacgct 600
Query: 935 gtgcttcctcatcaccacggccttcgttcaggtcgacactgatgaatggcagaacacctt 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgcttcctcatcaccacggccttcgttcaggtcgacactgatgaatggcagaacacctt 660
Query: 995 cttcatcatcaccatgg 1011
|||||||||||||||||
Sbjct: 661 cttcatcatcaccatgg 677
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,690
Number of extensions: 6177
Number of successful extensions: 6177
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6174
Number of HSP's successfully gapped: 1
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)