BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01968 (UTR included)
(2548 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 113 1e-24
BF01022B1H01 74 1e-12
BF01035X1C09 70 2e-11
BF01014A1H02 68 7e-11
>BF14_729_C3
Length = 2041
Score = 113 bits (57), Expect = 1e-24
Identities = 130/153 (84%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 2397 tactttgcagcaaccgtgatcacgggcagacgagatgaaaatatctgtcagttgat-ctt 2455
|||||||||||||||||||||||||||||||||| || ||| ||||||||||| | |||
Sbjct: 1622 tactttgcagcaaccgtgatcacgggcagacgaggtgtgaatgtctgtcagttggtcctt 1563
Query: 2456 gttattttgtcatctaccgccaacgacctcttaattttccggcgtaccgctgtggacgcc 2515
|||| ||| ||||||||||||| ||| ||||||| ||||||||||| |||| |||
Sbjct: 1562 gtta-tttatcatctaccgccatcgatttcttaatnnnntggcgtaccgctctggatgcc 1504
Query: 2516 tacagaatgcgctcactgtgtcacgaggtcctg 2548
|||||||||||||| ||||| |||||||||
Sbjct: 1503 ggcagaatgcgctcacggtgtcttgaggtcctg 1471
>BF01022B1H01
Length = 596
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2397 tactttgcagcaaccgtgatcacgggcagacgagatgaaaatatctgtcagttgatcttg 2456
|||| ||||||||||||||||||| | | ||||||||||||||||||| ||||| || ||
Sbjct: 325 tactctgcagcaaccgtgatcacgagtaaacgagatgaaaatatctgttagttggtcctg 266
Query: 2457 ttatt 2461
|||||
Sbjct: 265 ttatt 261
>BF01035X1C09
Length = 778
Score = 69.9 bits (35), Expect = 2e-11
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 2385 ccaacgtttctgt-actttgcagcaaccgtgatcacgggcagacgagatga 2434
|||||||||| || ||||||||||||||||||||||||| |||||||||||
Sbjct: 617 ccaacgtttcggttactttgcagcaaccgtgatcacgggaagacgagatga 667
>BF01014A1H02
Length = 787
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 2399 ctttgcagcaaccgtgatcacgggcagacgagatgaaa 2436
|||| |||||||||||||||||||||||||||||||||
Sbjct: 286 ctttacagcaaccgtgatcacgggcagacgagatgaaa 249
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,262
Number of extensions: 6902
Number of successful extensions: 6902
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6901
Number of HSP's successfully gapped: 4
Length of query: 2548
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2531
Effective length of database: 8,119,229
Effective search space: 20549768599
Effective search space used: 20549768599
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)