BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11810 (UTR included)
(2542 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A2C11 1491 0.0
BF01011A1H06 74 1e-12
>BF01047A2C11
Length = 805
Score = 1491 bits (752), Expect = 0.0
Identities = 791/805 (98%)
Strand = Plus / Plus
Query: 837 gctaaggaactgtgcttggaacacgaaccggacgtggatcctacaacattatttattccg 896
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1 gctaacgaactgtgcttggaacacgaaccggacgtggatcctacaacattgttcattccg 60
Query: 897 agagaaaggattgcttgcaccccatcagaatactgttgctttaaaagcgctccaatgaaa 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagaaaggattgcttgcaccccatcagaatactgttgctttaaaagcgctccaatgaaa 120
Query: 957 gctggggaggtatctggggaggggtccggggagaccataaacaaatctggggcaggtcgt 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctggggaggtatctggggaggggtccggggagaccataaacaaatctggggcaggtcgt 180
Query: 1017 aagtcgtgcaccaacgataaaaatgaacagggactgtgtgtcaggaaggcgtcctgcgtg 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtcgtgcaccaacgataaaaatgaacagggactgtgtgtcaggaaggcgtcctgcgtg 240
Query: 1077 aacgctgtgcagacagttgaccccacaatcaatttcaatctcagggaacgcgaattatgc 1136
|||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 241 aacgctgttcagacagttgaccccacaatcaatttcaatctcagggaacgtgagttatgc 300
Query: 1137 cactacttagagacctgctgcttggagaagaacatcaaaaagaaagctgtgaaaccgatt 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cactacttagagacctgctgcttggagaagaacatcaaaaagaaagctgtgaaaccgatt 360
Query: 1197 cgtcagcaaaacaccggctgcggctggagcaaccctggcgccaacgtgttcagggagaag 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtcagcaaaacaccggctgcggctggagcaaccctggcgccaacgtgttcagggagaag 420
Query: 1257 aactcgccaacaggtttcgctgattacggggaattcccgtggatggtagctttaatccag 1316
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 aactcgccaacaggtttcgctgattacggggaattcccgtggatggtagccttaatccag 480
Query: 1317 aagggtactggaaaagatggcttcaacgaaagttacgctggcggaggagttctcatccat 1376
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 aagggtactggaaaagatggcttcaacgaaagttacgctggcggaggggttctcatccat 540
Query: 1377 ccgtcagtagtcatgacagcggcacataaagtacaaaatttcaaaccggaagtggtaaaa 1436
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 541 ccgtcagtagtcatgacagcggcacacaaagtacaaagtttcaaaccggaagtggtaaaa 600
Query: 1437 atccgagccggcgaatgggacactcaaacagacgcggaagtggagccctatcaagagaga 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atccgagccggcgaatgggacactcaaacagacgcggaagtggagccctatcaagagaga 660
Query: 1497 gacgtctctaagatcattatacacgaaggtcacaatgaaaaacagcacaacgatgtggcg 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacgtctctaagatcattatacacgaaggtcacaatgaaaaacagcacaacgatgtggcg 720
Query: 1557 cttctgattctgaagtcgccagtggatctgtcagatgctcctcacatcgctgtaggttgt 1616
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 721 cttctcattctgaagtcgccagtggatctgtcagatgctcctcacatcgctgtnnnttgt 780
Query: 1617 ctagcatctcgtctccccccacctg 1641
|||||||||||||||||||||||||
Sbjct: 781 ctagcatctcgtctccccccacctg 805
>BF01011A1H06
Length = 739
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 336 tttaaatgaaactagtatttttcgcataaactacgcgtgatttat 380
|||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 574 tttaaatgaatctagtatttttcggataaactacgcgtgatttat 530
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,281
Number of extensions: 7780
Number of successful extensions: 7780
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7780
Number of HSP's successfully gapped: 2
Length of query: 2542
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2525
Effective length of database: 8,119,229
Effective search space: 20501053225
Effective search space used: 20501053225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)