BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11206 (UTR included)
(2917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_984_C1 3689 0.0
>BF14_984_C1
Length = 1979
Score = 3689 bits (1861), Expect = 0.0
Identities = 1903/1917 (99%)
Strand = Plus / Plus
Query: 779 gggtatggcgttttctatagaggagcgtcaggcgatgggtatccatggcctgttgccgcc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gggtatggcgttttctatagaggagcgtcaggcgatgggtatccatggcctgttgccgcc 122
Query: 839 cagggtgaagacacaggaggaacaggtacaactgtgcaagctgtccatagaccgctacga 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cagggtgaagacacaggaggaacaggtacaactgtgcaagctgtccatagaccgctacga 182
Query: 899 ggatcccctcaacaaatacatctaccttatgggcttgttggaccgtaacgagcacctgtt 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggatcccctcaacaaatacatctaccttatgggcttgttggaccgtaacgagcacctgtt 242
Query: 959 ctatcgcttcgtcggcgagaacgtggcagagatgatgccaatagtgtacacgccgacggt 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 243 ctatcgcttcgtcggcgagaacgtggcagagatgatgccaatagtgtacacgccgaccgt 302
Query: 1019 gggcctcgcctgccagaagtacggcctcgtgtaccgcaggcctcgggggctcttcatcac 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gggcctcgcctgccagaagtacggcctcgtgtaccgcaggcctcgggggctcttcatcac 362
Query: 1079 gatcaacgataagggttacgtgtacgacatacttaagaactggccggagacagacgtgcg 1138
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 363 gatcaacgataagggttacgtgtacgatatacttaagaactggccggagacagacgtgcg 422
Query: 1139 tgcgatcgttgtgaccgacggtgaacgtatcctgggtctgggtgacctgggagcctgcgg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgcgatcgttgtgaccgacggtgaacgtatcctgggtctgggtgacctgggagcctgcgg 482
Query: 1199 catgggcatcccggtagggaagctcgctctatacacagcactggccgggatcaaaccaca 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 catgggcatcccggtagggaagctcgctctatacacagcactggccgggatcaaaccaca 542
Query: 1259 ccagtgcctgcccatcactatcgacgtgggcaccaacaaccagggtatgttggacgaccc 1318
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcagtgtctgcccatcactatcgacgtgggcaccaacaaccagggtatgttggacgaccc 602
Query: 1319 gctgtacataggtctgagacagcgccgtgtccgcggcccgcagtacgacgagctcatcca 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gctgtacataggtctgagacagcgccgtgtccgcggcccgcagtacgacgagctcatcca 662
Query: 1379 ggagttcatggaggcggtggtgaagagatacggacagaactgtctcgtgcagttcgagga 1438
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 663 ggagttcatggaggcggtggtgaagagatacggacagaactgtctcgtacagttcgagga 722
Query: 1439 cttcggcaacgcgaacgccttcagactgctcgagaagtaccgcgggaaatactgcacctt 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cttcggcaacgcgaacgccttcagactgctcgagaagtaccgcgggaaatactgcacctt 782
Query: 1499 caacgacgacatccaaggcacggctgccgtggctgtggcgggtctgctggctagtctgag 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 caacgacgacatccaaggcacggctgccgtggctgtggcgggtctgctggctagtctgag 842
Query: 1559 ggtcaccaacaaacaactgtccgataatgttatagtgttccagggagcgggagaggcctc 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ggtcaccaacaaacaactgtccgataatgttatagtgttccagggagcgggagaggcctc 902
Query: 1619 tttaggtatcgcggagctgtgcgtgatggcgatgaaggccgagggtacgtcggaggagga 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tttaggtatcgcggagctgtgcgtgatggcgatgaaggccgagggtacgtcggaggagga 962
Query: 1679 cgccaggggtcgcatcttcatggtggactccaagggcctgatcgtcaagaacaggcccga 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 cgccaggggtcgcatcttcatggtggactccaagggcctgatcgtcaagaacaggcccga 1022
Query: 1739 gggcggactcaacgaacataaggagaagttcgccaaggactgtacgccaatcaggacact 1798
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gggcggactcaacgaacataaggagaagttcgccaaggactgtccgccaatcaggacact 1082
Query: 1799 cgccgaggtcgtggaggtcgtcaagccgtccgtactcatcggtgccgcggccataggtgg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 cgccgaggtcgtggaggtcgtcaagccgtccgtactcatcggtgccgcggccataggtgg 1142
Query: 1859 tgcgttcactccgtccattctccgcgcgatgggagacaacaaccagagacccgtggtgtt 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 tgcgttcactccgtccattctccgcgcgatgggagacaacaaccagagacccgtggtgtt 1202
Query: 1919 cgctctctccaacccgaccagtaaggcggagtgtaccgccgaggaggcctacgtcaacac 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 cgctctctccaacccgaccagtaaggcggagtgtaccgccgaggaggcctacgtcaacac 1262
Query: 1979 tgatgagcgtgcgatcttcgcctcaggatccccgttcccggactaccgcactaaggacgg 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 tgatgagcgtgcgatcttcgcctcaggatccccgttcccggactaccgcactaaggacgg 1322
Query: 2039 gcgagtgctccgcccgggacaagggaacaacgcctacatcttcccggggttggcgctcgg 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 gcgagtgctccgcccgggacaagggaacaacgcctacatcttcccggggttggcgctcgg 1382
Query: 2099 gatactgtgcgctggactcgtcgacgtctcggaagatttcatgttgctagctgctgaggc 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 gatactgtgcgctggactcgtcgacgtctcggaagatttcatgttgctagctgctgaggc 1442
Query: 2159 tttggcggacattgtatcacaagagaacttggaccagggcagtctgtacccgcccttaga 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 tttggcggacattgtatcacaagagaacttggaccagggcagtctgtacccgcccttaga 1502
Query: 2219 ggacatccaggagtgctccgtcaagatcgccaagaagatagtcgaacacgcatacgccac 2278
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 gaacatccaggagtgttccgtcaagatcgccaagaagatagtcgaacacgcatacgccac 1562
Query: 2279 tggcaaggcctctgtgcagcctccgcctctagacacagaggctttcatccgctctcagat 2338
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1563 tggcaaggcctctgtgcagcctccgcctctagacacagaagctttcatccgctctcagat 1622
Query: 2339 gtacgacgtccgctacggccgagcgctgccgcccgtctacgactggcctcacgacacgcc 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 gtacgacgtccgctacggccgagcgctgccgcccgtctacgactggcctcacgacacgcc 1682
Query: 2399 caaagttaatgttctctaattatattatttttgttacatttcgcttcaatgatggcaatt 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 caaagttaatgttctctaattatattatttttgttacatttcgcttcaatgatggcaatt 1742
Query: 2459 cgatgttatttatattgtaatggcaacacacgattcacaatatttattccaaagtttcgg 2518
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 cgatgttatttatatagtaatggcaacacacgattcacaatatttattccaaagtttcgg 1802
Query: 2519 tttacaaagcgtttcttatttaaatctcttcacctttggtagacgttggttttaaatgtg 2578
|||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct: 1803 tttacaaagcgtttcttatttaaatctcttcatcttttgtagacgtttgttttaaatgtg 1862
Query: 2579 acattaactagtctctgtattttcttgtgcaaacagttgatggtattggcgaagtcgtct 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 acattaactagtctctgtattttcttgtgcaaacagttgatggtattggcgaagtcgtct 1922
Query: 2639 ctcgggttatgatgactgttaatatattattttgtgataaaacgtgatataatttat 2695
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 ctcgagttatgatgactgttaatatattattttgtgataaaacgtgatataatttat 1979
Score = 117 bits (59), Expect = 1e-25
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 633 gatgggcagtccaacagccgactgtcgggcttggaccggctcaaacatcccggacttaat 692
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gatgggcagtccaacagccgactgtcgggcttggaccgtctcaaacatcccggacttaat 60
Query: 693 aag 695
|||
Sbjct: 61 aag 63
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,082
Number of extensions: 5638
Number of successful extensions: 5638
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5638
Number of HSP's successfully gapped: 2
Length of query: 2917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2899
Effective length of database: 8,109,745
Effective search space: 23510150755
Effective search space used: 23510150755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)