BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07462 (UTR included)
(1834 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_684_C1 1471 0.0
>BF14_684_C1
Length = 1584
Score = 1471 bits (742), Expect = 0.0
Identities = 762/768 (99%), Gaps = 3/768 (0%)
Strand = Plus / Plus
Query: 576 tgtaaagacttcgagaaagtcggtgctacgatcgctgtgactccctgcgatgtggtggaa 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tgtaaagacttcgagaaagtcggtgctacgatcgctgtgactccctgcgatgtggtggaa 876
Query: 636 gaggctgacatcaccttctcttgcgtagcggaccctcaggcggccaaagagatggtgttc 695
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gaggctgacatcaccttctcgtgcgtagcggaccctcaggcggccaaagagatggtgttc 936
Query: 696 ggcaactgcggagtgctgcactgtcccaccctggagggcaagggctacgtggagatgacc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 ggcaactgcggagtgctgcactgtcccaccctggagggcaagggctacgtggagatgacc 996
Query: 756 tccatagacgccgacacctcacacgacatagtggaggcgctcgggggaaagggagggaga 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 tccatagacgccgacacctcacacgacatagtggaggcgctcgggggaaagggagggaga 1056
Query: 816 tatctggaagcacagatccaaggctccaagacccaggcggaggagggtacgctcatcatc 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tatctggaagcacagatccaaggctccaagacccaggcggaggagggtacgctcatcatc 1116
Query: 876 ctggcggccggggaccgctcgctgttcgacgactgtcagtcgtgcttcaaggccatgagc 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 ctggcggccggggaccgctcgctgttcgacgactgtcagtcgtgcttcaaggccatgagc 1176
Query: 936 aagaactccttttacctcggt---gagataggcaacgcgtccaagatgaactcggtgctg 992
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1177 aagaactccttttacctcggtagtgagataggcaacgcgtccaagatgaactcggtgctg 1236
Query: 993 caggtggtgggcggagtgtcgctgggcgcgctggccgagggcctggcgctggcggaccgc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 caggtggtgggcggagtgtcgctgggcgcgctggccgagggcctggcgctggcggaccgc 1296
Query: 1053 gcaggcctcagccaggccgacctcctggatgtgctggcgctcacgccgctcgccagcccg 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 gcaggcctcagccaggccgacctcctggatgtgctggcgctcacgccgctcgccagcccg 1356
Query: 1113 cacctcatactcaagggacgagccatgatcgagtcgtcgtactcgacccaccagccgctg 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 cacctcatactcaagggacgagccatgatcgagtcgtcgtactcgacccaccagccgctg 1416
Query: 1173 agccacatgcagaaggacctgaagctggcgctggggctgggagacgccctggagcagtcc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 agccacatgcagaaggacctgaagctggcgctggggctgggagacgccctggagcagtcc 1476
Query: 1233 ctgccgctcaccgccaccaccaacgagatcttcaagcacgccaagcggctcggctacgcc 1292
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 ctgccgctcacagccaccaccaacgagatcttcaagcacgccaagcggctcggctacgcc 1536
Query: 1293 aaccatgacgtggccgccgtctacatccgcgccaggttctagcgcccg 1340
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 aaccacgacgtggccgccgtctacatccgcgccaggttctagcgcccg 1584
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,756
Number of extensions: 3951
Number of successful extensions: 3951
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3950
Number of HSP's successfully gapped: 1
Length of query: 1834
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1817
Effective length of database: 8,119,229
Effective search space: 14752639093
Effective search space used: 14752639093
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)