BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22168 (UTR included)
(2881 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2F10 1552 0.0
BF14_3049_C1 476 e-133
>BF01041A2F10
Length = 821
Score = 1552 bits (783), Expect = 0.0
Identities = 801/807 (99%)
Strand = Plus / Plus
Query: 789 catcttgtagctgtcagggagagaatacaacttgagggacaaatactttccaaagaaaaa 848
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 15 catcttgtagctgtcagggagagaatacaacttgggggacaaatactttccaaagaaaaa 74
Query: 849 tttgcttattactttcaccaggtgtatggatctctctcggctacacaggcttttgaaggt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tttgcttattactttcaccaggtgtatggatctctctcggctacacaggcttttgaaggt 134
Query: 909 gatatgcccaaatattttagtttcttaacagttttggccttcaatgtatttctgaaagag 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gatatgcccaaatattttagtttcttaacagttttggccttcaatgtatttctgaaagag 194
Query: 969 aaagtagatgtagctattattgaagtgggtattggtggtgtagttgattatactaatgtt 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaagtagatgtagctattattgaagtgggtattggtggtgtagttgattatactaatgtt 254
Query: 1029 ttaagaaaggttccagttgtgggtataactccattgggcttggatcatacatcaatacta 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttaagaaaggttccagttgtgggtataactccattgggcttggatcatacatcaatacta 314
Query: 1089 ggtaatacattgcccgagattgcagctgcaaaggctggaataatgaaacctggctgtgaa 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggtaatacattgcccgagattgcagctgcaaaggctggaataatgaaacctggctgtgaa 374
Query: 1149 gcatataccgtccaccaagccccagaggcgatggatgtcttagaaaaagttgcaaaagac 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcatataccgtccaccaagccccagaggcgatggatgtcttagaaaaagttgcaaaagac 434
Query: 1209 gttaagtgttctctaaatatagttcctgaacttagttcttataaatatgaaaacgggctc 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gttaagtgttctctaaatatagttcctgaacttagttcttataaatatgaaaacgggctc 494
Query: 1269 aagctctccatatatttagaagcctatgcaatgaatgcctctcttgccatacaactttca 1328
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagctctccatatatttagaagcctatgcaatgaatgcctctcttgccatacaactttcc 554
Query: 1329 catgcttggatacgaagaacaaggggaagcataaaaccaatggtgccaaggaatggtact 1388
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 555 catgcttggatacgaagaacacggggaagcataaaaccaatggtgccaaggaatggtact 614
Query: 1389 tgcaaaatagatgatcatatcttggttgacgtcttaacaaaagaaactgtaaaaggttta 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tgcaaaatagatgatcatatcttggttgacgtcttaacaaaagaaactgtaaaaggttta 674
Query: 1449 aaagaatttagatggcctggccggtaccagattgttaagacagattatgccgagttttat 1508
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 675 aaagaatttagatggcctggccggtaccaggttgttaagacagattatgccgagttttat 734
Query: 1509 ttggatggagcacacacaaaggagtcaatggatatctgtgcaaaatggttcacagatagc 1568
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 735 ttggatggagcacacacaaaggagtcaatggatatctgtgcaaaatggttcacagacagt 794
Query: 1569 aacagatcttctgctcaagcactgatc 1595
|||||||||||||||||||||||||||
Sbjct: 795 aacagatcttctgctcaagcactgatc 821
>BF14_3049_C1
Length = 1359
Score = 476 bits (240), Expect = e-133
Identities = 246/248 (99%)
Strand = Plus / Plus
Query: 1875 aaattggtggccatagctgaagtcatgatgcacatgtggatgtggtttggctatgacctg 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aaattggtggccatagctgaagtcatgatgcacatgtggatgtggtttggctatgacctg 275
Query: 1935 ggcgacttcctgttttctggtctggtcgtcaacacgaggtggtcgttcgctctcacctgg 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggcgacttcctgttttctggtctggtcgtcaacacgaggtggtcgttcgctctcacctgg 335
Query: 1995 atagtgctgtttttcgtggctctgctcttcgagggatcgaaggtatatctcgctcgtgtt 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atagtgctgtttttcgtggctctgctcttcgagggatcgaaggtatatctcgctcgtgtt 395
Query: 2055 cagcgcgaggcacttcggaaattgcgtcctcacggctctgacgaaagacggaacttgtta 2114
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 396 caacgcgaggcacttcggaaattgcgtcctcacggctgtgacgaaagacggaacttgtta 455
Query: 2115 tgtgagcg 2122
||||||||
Sbjct: 456 tgtgagcg 463
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 350,591
Number of extensions: 7621
Number of successful extensions: 7621
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7621
Number of HSP's successfully gapped: 2
Length of query: 2881
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2864
Effective length of database: 8,119,229
Effective search space: 23253471856
Effective search space used: 23253471856
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)