BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10621 (UTR included)
(3592 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2573_C1 1737 0.0
>BF14_2573_C1
Length = 880
Score = 1737 bits (876), Expect = 0.0
Identities = 879/880 (99%)
Strand = Plus / Plus
Query: 1861 gccagcgcatgatagtgccagtcgatggtcactggttgaacctgatgatgggaaagaggt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccagcgcatgatagtgccagtcgatggtcactggttgaacctgatgatgggaaagaggt 60
Query: 1921 tccatgaaaaccttaattctaattcagaaaacgattcagccagttcatatgaatccgtta 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccatgaaaaccttaattctaattcagaaaacgattcagccagttcatatgaatccgtta 120
Query: 1981 aaatatcggaacgcgacgagcaaccctctccctccgtgtgtacctccacccctaggaaat 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatatcggaacgcgacgagcaaccctctccctccgtgtgtacctccacccctaggaaat 180
Query: 2041 ccaatgccaaagatgatacattagaaaaaattacagaaataaatgaatctgagtcaaatg 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaatgccaaagatgatacattagaaaaaattacagaaataaatgaatctgagtcaaatg 240
Query: 2101 aagcaaaatcaacctgcgaaaattccacagtgccatcactaaacacacctatactctgtt 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcaaaatcaacctgcgaaaattccacagtgccatcactaaacacacctatactctgtt 300
Query: 2161 ctaagttagataaggtacccaaagacaatactgatgacattaactcgagtaataacgact 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaagttagataaggtacccaaagacaatactgatgacattaactcgagtaataacgact 360
Query: 2221 gtaatattaatatcaacactcatacctcaaggatagcaactatgaacttagaagtttcca 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaatattaatatcaacactcatacctcaaggatagcaactatgaacttagaagtttcca 420
Query: 2281 agttatccaccaaaaacattattgaacattccaagataatgtcgctccagcacatggaca 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttatccaccaaaaacattattgaacattccaagataatgtcgctccagcacatggaca 480
Query: 2341 gtgccccagcatatcccagcagtttcatacatgaatttgaatcttcaggggacgaaacgt 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgccccagcatatcccagcagtttcatacatgaatttgaatcttcaggggacgaaacgt 540
Query: 2401 cgagtagaggaacgttggatgcaatcataccgccgttaaaagattttcaagggaagaata 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgagtagaggaacgttggatgcaatcataccgccgttaaaagattttcaagggaagaata 600
Query: 2461 acccatttttaatgcaaaatacatatccttcaaaaactccattttcatcgaatatgaata 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acccatttttaatgcaaaatacatatccttcaaaaactccattttcatcgaatatgaata 660
Query: 2521 ttcataacagacaaaatggtcgaaatcattcgcggttctctctaccaaatcaattaaatc 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcataacagacaaaatggtcgaaatcattcgcggttctctctaccaaatcaattaaatc 720
Query: 2581 ctctaatggggcctttaatacgaccattgaaaagaaagctcagtgaaaaagatattgtga 2640
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 721 ctctaatggggcctttaatacgaccattgaaaagaaagctcagtgaaaaagatattgtta 780
Query: 2641 taggcccgaacggtgaagtcaagagacggaaatacagaagaccgcgaaaacatttacaac 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taggcccgaacggtgaagtcaagagacggaaatacagaagaccgcgaaaacatttacaac 840
Query: 2701 ttcagctaaacaaatcatgtccactgcccgaagacagctc 2740
||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttcagctaaacaaatcatgtccactgcccgaagacagctc 880
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 385,519
Number of extensions: 7745
Number of successful extensions: 7745
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7745
Number of HSP's successfully gapped: 1
Length of query: 3592
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3574
Effective length of database: 8,109,745
Effective search space: 28984228630
Effective search space used: 28984228630
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)