BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04251 (UTR included)
(2524 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1081_C1 1633 0.0
BF01053B2G02 377 e-104
>BF14_1081_C1
Length = 858
Score = 1633 bits (824), Expect = 0.0
Identities = 840/844 (99%), Gaps = 1/844 (0%)
Strand = Plus / Plus
Query: 274 gattggagtagaagtgtacaacg-tttcccaaacataatcgatatgacgacagacacttt 332
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gattggagtagaagtgtacaacgctttcccaaacataatcgatatgacgacagacacttt 74
Query: 333 ataaatgaaggccgctgtgatttgaaccattagtcgaaaaccttacacctccgagacgtt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ataaatgaaggccgctgtgatttgaaccattagtcgaaaaccttacacctccgagacgtt 134
Query: 393 cggctacagtgggagccaacgttacaccatatcgtgacaatattaaacgtacaacaggtg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cggctacagtgggagccaacgttacaccatatcgtgacaatattaaacgtacaacaggtg 194
Query: 453 tatataattgtgcagtttgtgttttacaagtgtcatcgattacataaaatgccctgtccg 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tatataattgtgcagtttgtgttttacaagtgtcatcgattacataaaatgccctgtccg 254
Query: 513 tttttaggatcaatgaatcaaacctttttaaggaattacagcagcgtactgctaaagcag 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tttttaggatcaatgaatcaaacctttttaaggaattacagcagcgtactgctaaagcag 314
Query: 573 tatggaaactactgccctatactttcaagaaactttcgctctctgggcgtagatgaaacg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tatggaaactactgccctatactttcaagaaactttcgctctctgggcgtagatgaaacg 374
Query: 633 aaatgcccatttattcaaaagaactccattatttcggaagcgcctaaagaaatgactgaa 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaatgcccatttattcaaaagaactccattatttcggaagcgcctaaagaaatgactgaa 434
Query: 693 gatattgtagacagcgctgcaccaacttatcaatatgaaaatttctttagcaaacagatc 752
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gatattgtagagagcgctgcaccaacttatcaatatgaaaatttctttagcaaacagatc 494
Query: 753 aatgctaaaaaaaatgattactcgtatcgagtatttagaaaggtgtcacgactggcggcc 812
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aacgctaaaaaaaatgattactcgtatcgagtatttagaaaggtgtcacgactggcggcc 554
Query: 813 gagggcgcgtatccgcaggcattggaagggtctgacaaccgtcgcgtgaccgtgtggtgc 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gagggcgcgtatccgcaggcattggaagggtctgacaaccgtcgcgtgaccgtgtggtgc 614
Query: 873 gccaacgactacctcggagcatcgcgtcaccccgttgtccaggatgctgcaatttctgcc 932
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 615 gccaacgactacctcggagcatcacgtcaccccgttgtccaggatgctgcaatttctgcc 674
Query: 933 attagatcctacggaaccggagcgggaggcactcgtaacatcgctggtaactcacagatg 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 attagatcctacggaaccggagcgggaggcactcgtaacatcgctggtaactcacagatg 734
Query: 993 actgaaaaactagaacatgagatagccaaactccataaaaaacccgcagctttaatattt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 actgaaaaactagaacatgagatagccaaactccataaaaaacccgcagctttaatattt 794
Query: 1053 agttcctgtttcgttgccaatgatgcgactctctctacattagcgaaaatactaccagga 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agttcctgtttcgttgccaatgatgcgactctctctacattagcgaaaatactaccagga 854
Query: 1113 tgta 1116
||||
Sbjct: 855 tgta 858
>BF01053B2G02
Length = 307
Score = 377 bits (190), Expect = e-104
Identities = 196/198 (98%)
Strand = Plus / Minus
Query: 2140 tattatgtattgtattatttaatcccagtatttgatgaggccgtcccagcccgcggtcag 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tattatgtattgtattatttaatcccagtatttgatgaggccgtcccagcccgcggtcag 221
Query: 2200 gaggcggctcggctcgtggggatgccacagagacgagatacaaacaccatcatgcgcttt 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaggcggctcggctcgtggggatgccacagagacgagatacaaacaccatcatgcgcttt 161
Query: 2260 ccactttttataaagcttggttgtcttccaatcccagatatacgccttgccgtccgcgtc 2319
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ccacttcttataaagcttcgttgtcttccaatcccagatatacgccttgccgtccgcgtc 101
Query: 2320 tcccgacaccagataact 2337
||||||||||||||||||
Sbjct: 100 tcccgacaccagataact 83
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,712
Number of extensions: 5265
Number of successful extensions: 5265
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5264
Number of HSP's successfully gapped: 2
Length of query: 2524
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2507
Effective length of database: 8,119,229
Effective search space: 20354907103
Effective search space used: 20354907103
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)