BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07234 (UTR included)
(1270 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B1B06 1150 0.0
>BF01032B1B06
Length = 694
Score = 1150 bits (580), Expect = 0.0
Identities = 589/592 (99%)
Strand = Plus / Plus
Query: 81 agcacactcagatcgacccaagctgttagtccagcaacaggtccaggaggcggtgaagca 140
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 agcacactcagatcgacccgagctgttagtccagcaacaggtccaggaggcggtgaagca 162
Query: 141 actgtttggagctagcggcgcgggaagcgtgattgacgtgctagcggtgagggcggggcg 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 actgtttggagctagcggcgcgggaagcgtgattgacgtgctagcggtgagggcggggcg 222
Query: 201 ggctctgctccgtgtaccacggcaacagctgaggaggctccgcgcggcgctggctctgag 260
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 223 ggctctgctccgtgtaccacggccgcagctgaggaggctccgcgcggcgctggctctgag 282
Query: 261 acccaccgtgcgagtgcgagcggaggccgcgtcgctacaggcgctggtgtaagtagcaac 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acccaccgtgcgagtgcgagcggaggccgcgtcgctacaggcgctggtgtaagtagcaac 342
Query: 321 atggcggagggcgggcggcgcgtgtgggccaccggctcgggtggcaaggacgtggtcgtg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atggcggagggcgggcggcgcgtgtgggccaccggctcgggtggcaaggacgtggtcgtg 402
Query: 381 gtggcgtcgcgggccgagctggcggctcccagtacggtgactctgccggagcccgagccg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtggcgtcgcgggccgagctggcggctcccagtacggtgactctgccggagcccgagccg 462
Query: 441 gcgccggggctgctgctcgcggacggctccatcaactggggttgtccctgcctcggtgga 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcgccggggctgctgctcgcggacggctccatcaactggggttgtccctgcctcggtgga 522
Query: 501 atggccacgggtccctgcggtactcagtttcgtgatgctttctcctgtttccactacagt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atggccacgggtccctgcggtactcagtttcgtgatgctttctcctgtttccactacagt 582
Query: 561 gaggcagatccgaagggcagcgactgttacgagaagttcagtgtgatgcaggagtgtatg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaggcagatccgaagggcagcgactgttacgagaagttcagtgtgatgcaggagtgtatg 642
Query: 621 tcacagtacccggagctttatgggaaggacgaggacgaggacctggcggctg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tcacagtacccggagctttatgggaaggacgaggacgaggacctggcggctg 694
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 142,824
Number of extensions: 3396
Number of successful extensions: 3396
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3396
Number of HSP's successfully gapped: 1
Length of query: 1270
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1253
Effective length of database: 8,119,229
Effective search space: 10173393937
Effective search space used: 10173393937
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)