BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21005 (UTR included)
(5638 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2H09 1483 0.0
BF01031B2E05 1104 0.0
>BF01034A2H09
Length = 792
Score = 1483 bits (748), Expect = 0.0
Identities = 784/796 (98%), Gaps = 5/796 (0%)
Strand = Plus / Plus
Query: 4748 ggactccgattgtctattcgattcgttaatcgaggacaccaagaaggaggagtcggcgaa 4807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggactccgattgtctattcgattcgttaatcgaggacaccaagaaggaggagtcggcgaa 60
Query: 4808 aaataatgaaccgataccaacaacggtcctgtcgagtgacgacgattcagttcaagaaac 4867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaataatgaaccgataccaacaacggtcctgtcgagtgacgacgattcagttcaagaaac 120
Query: 4868 tgctcccaagaagaagcagaccaagaggaagttgatgaacgtcgagaaagagaagcctaa 4927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctcccaagaagaagcagaccaagaggaagttgatgaacgtcgagaaagagaagcctaa 180
Query: 4928 agcgaggaagaggccggccaaggtggtgttcagccacagcacggacggggaggacgagga 4987
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 agcgaggaagaggccggccaaggtggtgttcagccagagcacggacggggaggacgagga 240
Query: 4988 ggccttcgagactaaaaagacaaagaagaaggccaatccgaaaaaacgacagaagaaagc 5047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggccttcgagactaaaaagacaaagaagaaggccaatccgaaaaaacgacagaagaaagc 300
Query: 5048 cgactcggacagctcttgcgaagaaattactcgcgggagagataaggacaaggtgtaccg 5107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgactcggacagctcttgcgaagaaattactcgcgggagagataaggacaaggtgtaccg 360
Query: 5108 cttcagcgacggatccgacagcgatctataaggatctatagatcatagatcactctaatg 5167
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 cttcagcgacggatccgacagcgatctataatgatctatagatcatagatcactctaatg 420
Query: 5168 tactgttgtataagatcggactattcatgtcgcatggatgttctgtgtaaatattcgtct 5227
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactgttgtataagatcggactgttcatgtcgcatggatgttctgtgtaaatattcgtct 480
Query: 5228 agatgtaagaatttctgacaagtattttaatattaatattttgtaagtttcttttaaaga 5287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatgtaagaatttctgacaagtattttaatattaatattttgtaagtttcttttaaaga 540
Query: 5288 agaatcttttaaagccaacgctcacttcgacgtagttaagttaactacccgcgggcttgt 5347
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 541 agaatcttttaaagccaacgctcacttcgacgt-----agttaactacccgcggggttgt 595
Query: 5348 agagcccgtttttaatataaagttatatgactggttttattttcttatcaacttttatcg 5407
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agagcccgtttttaatacaaagttatatgactggttttattttcttatcaacttttatcg 655
Query: 5408 ttgggacgagtttgtttcatggattatgaaatatatataatgtatagtgtgtgcgtcacg 5467
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 656 ttgggacgcgtttgtttcatggattatgaaatatatataatgtacagtgtgtgcgtcacg 715
Query: 5468 tccggtacgggactgctcaatgatgacgtcattatttacactaacttaatatattttaga 5527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tccggtacgggactgctcaatgatgacgtcattatttacactaacttaatatattttaga 775
Query: 5528 caagtgtaaataattc 5543
||||||||||||||||
Sbjct: 776 caagtgtaaataattc 791
>BF01031B2E05
Length = 629
Score = 1104 bits (557), Expect = 0.0
Identities = 578/585 (98%)
Strand = Plus / Plus
Query: 5005 agacaaagaagaaggccaatccgaaaaaacgacagaagaaagccgactcggacagctctt 5064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 agacaaagaagaaggccaatccgaaaaaacgacagaagaaagccgactcggacagctctt 104
Query: 5065 gcgaagaaattactcgcgggagagataaggacaaggtgtaccgcttcagcgacggatccg 5124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gcgaagaaattactcgcgggagagataaggacaaggtgtaccgcttcagcgacggatccg 164
Query: 5125 acagcgatctataaggatctatagatcatagatcactctaatgtactgttgtataagatc 5184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 165 acagcgatctataaggatctatagatcatagatcactccaatgtactgttgtataagatc 224
Query: 5185 ggactattcatgtcgcatggatgttctgtgtaaatattcgtctagatgtaagaatttctg 5244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggactgttcatgtcgcatggatgttctgtgtaaatattcgtctagatgtaagaatttctg 284
Query: 5245 acaagtattttaatattaatattttgtaagtttcttttaaagaagaatcttttaaagcca 5304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acaagtattttaatattaatattttgtaagtttcttttaaagaagaatcttttaaagcca 344
Query: 5305 acgctcacttcgacgtagttaagttaactacccgcgggcttgtagagcccgtttttaata 5364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acgctcacttcgacgtagttaagttaactacccgcgggcttgtagagcccgtttttaata 404
Query: 5365 taaagttatatgactggttttattttcttatcaacttttatcgttgggacgagtttgttt 5424
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 405 caaagttatatgactggttttattttcttatcaacttttatcgttgggacgcgtttgttt 464
Query: 5425 catggattatgaaatatatataatgtatagtgtgtgcgtcacgtccggtacgggactgct 5484
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 465 catggattatgaaatatatataatgtacagtgtgtgcgtcacgtccggtacgggactgct 524
Query: 5485 caatgatgacgtcattatttacactaacttaatatattttagacaagtgtaaataattcc 5544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caatgatgacgtcattatttacactaacttaatatattttagacaagtgtaaataattct 584
Query: 5545 aaattttatattacctttctcttcctgtgtgttccttgtttgtgt 5589
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaatttaatattacctttctcttcctgtgtgttccttgtttgtgt 629
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 545,582
Number of extensions: 10046
Number of successful extensions: 10046
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10045
Number of HSP's successfully gapped: 2
Length of query: 5638
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5620
Effective length of database: 8,109,745
Effective search space: 45576766900
Effective search space used: 45576766900
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)