BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11195 (UTR included)
(2566 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1070_C1 934 0.0
>BF14_1070_C1
Length = 813
Score = 934 bits (471), Expect = 0.0
Identities = 474/475 (99%)
Strand = Plus / Plus
Query: 905 ggtatttacaccaggcattcacaagaaaccctacaagaaaagttcaaaaataaaacagat 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggtatttacaccaggcattcacaagaaaccctacaagaaaagttcaaaaataaaacagat 398
Query: 965 tcagttagaacaggacagtggcaagtcccttcatgactcagagttaaagaggagtctcgt 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tcagttagaacaggacagtggcaagtcccttcatgactcagagttaaagaggagtctcgt 458
Query: 1025 tgaccttaacagagctggtgcaccacttattgaacttgtttttgaacccgatttggagga 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgaccttaacagagctggtgcaccacttattgaacttgtttttgaacccgatttggagga 518
Query: 1085 tggagaagaggcagcggctcttgtaaaggagttagttttaatagtccaacgtctaggagc 1144
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tggagaagaggcagcagctcttgtaaaggagttagttttaatagtccaacgtctaggagc 578
Query: 1145 ttgttctggtcgtatggaagaaggagctctgagagtagatgctaatgtgtctctaagacg 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttgttctggtcgtatggaagaaggagctctgagagtagatgctaatgtgtctctaagacg 638
Query: 1205 atttggtgatccactctcaacacgcacagagataaaaaacattggttcagtccgaggagt 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 atttggtgatccactctcaacacgcacagagataaaaaacattggttcagtccgaggagt 698
Query: 1265 ggctggggctgttcatcatgagattgaacgacagcggtctatattggagaatggcggaag 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ggctggggctgttcatcatgagattgaacgacagcggtctatattggagaatggcggaag 758
Query: 1325 gattattaatgagactcgagcttgggatgctaccgccaaagttactatacccatg 1379
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gattattaatgagactcgagcttgggatgctaccgccaaagttactatacccatg 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 394,952
Number of extensions: 8613
Number of successful extensions: 8613
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8613
Number of HSP's successfully gapped: 1
Length of query: 2566
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2549
Effective length of database: 8,119,229
Effective search space: 20695914721
Effective search space used: 20695914721
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)