BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13431 (UTR included)
(1690 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2B04 1437 0.0
BF14_2975_C1 153 1e-36
BF01044A2F08 127 6e-29
>BF01022A2B04
Length = 760
Score = 1437 bits (725), Expect = 0.0
Identities = 746/753 (99%)
Strand = Plus / Plus
Query: 401 ttttacaaaataaacaagcctggaattctataaataacggaacacgtacattcaacatat 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 ttttacaaaataaacaagcctggaattctataaataacggaacacgtacattcaacatat 67
Query: 461 acctctagtaataactaataagtaacaagtaattatcagaatgcgctacatattcctatc 520
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 68 acctctagtaataactaataagtaacaagtaattatcacaatgcgctacatattcctatc 127
Query: 521 cacaatattcagtatggtgttcgcatacgaaaaggacatgacttttacgatacaggcggg 580
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 128 cacaatattcagtatagtgttcgcttacgaaaaggacatgacttttacgatacaggcggg 187
Query: 581 aaaaatggaatgtttttatcaaaaagttgctgtgggcgaagttattgacgtggagtatca 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aaaaatggaatgtttttatcaaaaagttgctgtgggcgaagttattgacgtggagtatca 247
Query: 641 agtcatcgatgcttctcacggggagctggatgtgtctttccagctggtggatcctatggg 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agtcatcgatgcttctcacggggagctggatgtgtctttccagctggtggatcctatggg 307
Query: 701 acgtgggatcgtcacagattataagaagccggacaactctcatagacacacatcaacatt 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acgtgggatcgtcacagattataagaagccggacaactctcatagacacacatcaacatt 367
Query: 761 ggaaggcgattacagattctgtttcgacaacacattcagcactttcagcgagaaaacggt 820
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 ggaaggcgattacagattctgtttcgacaacaccttcagcactttcagcgagaaaacggt 427
Query: 821 gttcttcgatttactgatagaaaatgacgagccccacctcaacgactatgacgaggagaa 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gttcttcgatttactgatagaaaatgacgagccccacctcaacgactatgacgaggagaa 487
Query: 881 ggaactggaacttggtaattcagcggagtcctacatgatgcgagtcaaggacgtgttgga 940
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 488 ggaactggaacttggtaattcagcggagtcctacatgatgcgagtcaaggatgtgttgga 547
Query: 941 gtcggtgtacaaggtccgggagcacgtgtccacagcaaggaggctgcaggaactgctctc 1000
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 548 gtcggtgtacaaggtccgggagcacgtgtccaccgcaaggaggctgcaggaactgctctc 607
Query: 1001 agcccacgaggccagggacaggaacctcgcagaggatatgtgtgacagagtcatgaactg 1060
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 608 agcccacgaggccagggacaggaacctcgcagaggacatgtgtgacagagtcatgaactg 667
Query: 1061 gtcgctcggccaaatgattctgatgctgatagttgggatcactcaggtatacttcctcaa 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gtcgctcggccaaatgattctgatgctgatagttgggatcactcaggtatacttcctcaa 727
Query: 1121 gagcctgttcgaggatcccaccagtcgcggctt 1153
|||||||||||||||||||||||||||||||||
Sbjct: 728 gagcctgttcgaggatcccaccagtcgcggctt 760
>BF14_2975_C1
Length = 761
Score = 153 bits (77), Expect = 1e-36
Identities = 86/89 (96%)
Strand = Plus / Minus
Query: 1 catcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 89 catcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactaca 30
Query: 61 atgtaataaaagttaactaaattgtttac 89
||||||| |||||| ||||||||||||||
Sbjct: 29 atgtaatcaaagtttactaaattgtttac 1
>BF01044A2F08
Length = 732
Score = 127 bits (64), Expect = 6e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 1 catcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 catcgcattagaactcggtccggacattttatttaaattagtattaaaagatttactaaa 5
Query: 61 atgt 64
||||
Sbjct: 4 atgt 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,597
Number of extensions: 9093
Number of successful extensions: 9093
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9093
Number of HSP's successfully gapped: 3
Length of query: 1690
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1673
Effective length of database: 8,119,229
Effective search space: 13583470117
Effective search space used: 13583470117
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)