BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09825 (UTR included)
(2827 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1B08 1138 0.0
>BF01039B1B08
Length = 699
Score = 1138 bits (574), Expect = 0.0
Identities = 583/586 (99%)
Strand = Plus / Plus
Query: 484 aggtgttatacgctgtcatgaagggtgccaacgggacagacatcgagatcctctcgctgc 543
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aggtgttgtacgctgtcatgaagggtgccaacgggacagacatcgagatcctctcgctgc 173
Query: 544 cggtcgatgaagacttcgacccgaacgttcagtttgacaacctgtcccccaagaacactc 603
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 174 cggtcgatgaagacttcgaccccaacgttcagtttgacaacctgtcccccaagaacactc 233
Query: 604 ccgcctccaccatcgatgtcaagctttgggcacaaactatctgcagtcagctggtcctgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ccgcctccaccatcgatgtcaagctttgggcacaaactatctgcagtcagctggtcctgt 293
Query: 664 accttggtcagtggccgttgtggagtggttgtcagacgtcgtccagtgtgtgcgaacaac 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 accttggtcagtggccgttgtggagtggttgtcagacgtcgtccagtgtgtgcgaacaac 353
Query: 724 acgacagcccgtccctgggcccggagctgggcgcggccgtgctccgcgctcctcacgtcc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acgacagcccgtccctgggcccggagctgggcgcggccgtgctccgcgctcctcacgtcc 413
Query: 784 aactcatgagattcagtgactcgacgctggccagcctcattgaactccccgccatggact 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aactcatgagattcagtgactcgacgctggccagcctcattgaactccccgccatggact 473
Query: 844 taccatgtagtggtactgcacccggtctagcaacttccgaccgtcaagtgcgcgtgttgc 903
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 taccatgtagcggtactgcacccggtctagcaacttccgaccgtcaagtgcgcgtgttgc 533
Query: 904 tgcgagatatatgcggcaaggcgtgttgggacgcctccgccctccactacgacccgacag 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgcgagatatatgcggcaaggcgtgttgggacgcctccgccctccactacgacccgacag 593
Query: 964 tcgccggagcggaacaacctcagcagataccagttccgaagaccgtcgagagtccgaggg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcgccggagcggaacaacctcagcagataccagttccgaagaccgtcgagagtccgaggg 653
Query: 1024 ataacacgctgtcgtctctccctccgccgctgccgcctgatctgct 1069
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ataacacgctgtcgtctctccctccgccgctgccgcctgatctgct 699
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,496
Number of extensions: 6342
Number of successful extensions: 6342
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6342
Number of HSP's successfully gapped: 1
Length of query: 2827
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2810
Effective length of database: 8,119,229
Effective search space: 22815033490
Effective search space used: 22815033490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)