BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11889 (UTR included)
(2830 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2E02 1522 0.0
BF01037B1H08 511 e-144
>BF01051B2E02
Length = 814
Score = 1522 bits (768), Expect = 0.0
Identities = 795/804 (98%), Gaps = 1/804 (0%)
Strand = Plus / Plus
Query: 199 aacttgtttattttgtattattgtactttggccggtataaggcgtttacaatcttatttt 258
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12 aacttgtttattttgtattattgtactttggccggtataaggcgtttaca-tcttatttt 70
Query: 259 attcttatcactaagagaacaaaagtgaaatctacaaattaatattcaaagcttaagaaa 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 attcttatcactaagagaacaaaagtgaaatctacaaattaatattcaaagcttaagaaa 130
Query: 319 taaatgagaatatagcatttactatcattccctagatatatttaatatataacactattt 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 taaatgagaatatagcatttactatcattccctagatatatttaatatataacactattt 190
Query: 379 ttaaaatgatgttgcttaaattttcttcattgcctaagccattacaccgaagttacgcga 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttaaaatgatgttgcttaaattttcttcattgcctaagccattacaccgaagttacgcga 250
Query: 439 ccaaaggaaatcaggttaaagatgttaattatcaatatttacaaagaagcaaagtgccaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccaaaggaaatcaggttaaagatgttaattatcaatatttacaaagaagcaaagtgccaa 310
Query: 499 ctatgcattttcaaaagtcattgccacgtctgccaataccagatttaagcaaaagccgcg 558
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 311 ctatgcattttcaaaagtcattgccacgtctgccaataccagatttaagtaaaagtcgcg 370
Query: 559 atcgttaccttaacgctatccggcccttacttgctaaagaccagtatgaaaccgctgtga 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atcgttaccttaacgctatccggcccttacttgctaaagaccagtatgaaaccgctgtga 430
Query: 619 aaagaactgataaatttgtaaataatgagggtaaagaattacaatccaaattagttaata 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaagaactgataaatttgtaaataatgagggtaaagaattacaatccaaattagttaata 490
Query: 679 aggacaaaatgaacaagcaaaccagctacatatcagattattggtttgatctttatttaa 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggacaaaatgaacaagcaaaccagctacatatcagattattggtttgatctttatttaa 550
Query: 739 gagatagatcagctctacccattaactataatccattgattgtgtttcaaaatgatttaa 798
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gagatagatcagctcttcccattaactataatccattgattgtgtttcaaaatgatttaa 610
Query: 799 gaccagattataatgaccagttattaagaacctcaaatttattagtgagtgcagtcagat 858
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaccggattataatgaccagttattaagaacctcaaatttattagtgagtgcagtcagat 670
Query: 859 tcatgatggccctaagggaacaaattcttgaacctgaagtgtatcacttgcaaccaaaaa 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tcatgatggccctaagggaacaaattcttgaacctgaagtgtatcacttgcaaccaaaaa 730
Query: 919 aaagcaacactcctttattcaggaccgttactggtttgcttccagagagcctatcttggt 978
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 731 aaagcaacactcctttattcannaccgttactggtttgcttccagnnagcctatcttggt 790
Query: 979 atggagcctatttattcaaagcat 1002
||||||||||||||||||||||||
Sbjct: 791 atggagcctatttattcaaagcat 814
>BF01037B1H08
Length = 758
Score = 511 bits (258), Expect = e-144
Identities = 261/262 (99%)
Strand = Plus / Plus
Query: 1900 aggcgttctgcgacctacttcattctaagaaggcatcagatcaagagctgaggtcattga 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggcgttctgcgacctacttcattctaagaaggcatcagatcaagagctgaggtcattga 556
Query: 1960 tgcaggagtgttccttatatcattccaacttaacgaaagaagcagctatgggacagggtt 2019
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 557 tgcaggagtgttccttatatcattccaacttaacgaaagaaacagctatgggacagggtt 616
Query: 2020 ttgaccgacacatgtttgcactgatgaagatagccgaagagaaccatatgccaagacctg 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttgaccgacacatgtttgcactgatgaagatagccgaagagaaccatatgccaagacctg 676
Query: 2080 aaatatttgattcctatgaatacaagtacttgaataagtcaatactgagtaccagcacat 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaatatttgattcctatgaatacaagtacttgaataagtcaatactgagtaccagcacat 736
Query: 2140 tgtcctctccaagtgtactggc 2161
||||||||||||||||||||||
Sbjct: 737 tgtcctctccaagtgtactggc 758
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 455,714
Number of extensions: 10765
Number of successful extensions: 10765
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10764
Number of HSP's successfully gapped: 2
Length of query: 2830
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2813
Effective length of database: 8,119,229
Effective search space: 22839391177
Effective search space used: 22839391177
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)