BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16331 (UTR included)
(3064 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1E10 305 2e-82
BF01019A1H08 101 6e-21
BF14_335_C4 78 9e-14
BF01049B1F01 72 6e-12
>BF01026A1E10
Length = 717
Score = 305 bits (154), Expect = 2e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 597 ttcgtcagattcgcgaacatagaggaggatactccgtcgtatcatcgcagatacgacttc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttcgtcagattcgcgaacatagaggaggatactccgtcgtatcatcgcagatacgacttc 525
Query: 657 ttcgtgtccaagttctccgccatgtgtcacagtaaccacaacgaccaggcggtcagagac 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttcgtgtccaagttctccgccatgtgtcacagtaaccacaacgaccaggcggtcagagac 585
Query: 717 aacatccggctcgctgggatacaggggctccagg 750
||||||||||||||||||||||||||||||||||
Sbjct: 586 aacatccggctcgctgggatacaggggctccagg 619
Score = 161 bits (81), Expect = 8e-39
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 821 ccagggcgtgataaggaagacagtgtccgacgacctcgtggagaacatctgggaggccca 880
||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 615 ccagggcgtgataaggaagacggtgtccgacgacctcgtggannacatctgggnnnncca 674
Query: 881 gcacatggacaagatcgtaccctcgctgctctataacatgcag 923
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcacatggacaagatcgtaccctcgctgctctataacatgcag 717
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 6e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 751 ttcaccgtgctggtgccgggttcatcgcgttgcagagagaggagcatcaactgtgcctgg 810
|||||||||| |||||||||| ||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 392 ttcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctgg 451
Query: 811 gacttgcgacccagg 825
|| ||||||||||||
Sbjct: 452 gagttgcgacccagg 466
>BF14_335_C4
Length = 1491
Score = 77.8 bits (39), Expect = 9e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 751 ttcaccgtgctggtgccgggttcatcgcgttgcagagagaggagcatcaactgtgcctgg 810
|||||||||| | ||| ||| ||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 1336 ttcaccgtgcggttgcggggaccatcgcgttgcag-gagaggagcttcaacagtgcctgg 1278
Query: 811 gacttgcgacccagg 825
|||||||||||||||
Sbjct: 1277 gacttgcgacccagg 1263
>BF01049B1F01
Length = 840
Score = 71.9 bits (36), Expect = 6e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 778 cgttgcagagagaggagcatcaactgtgcctgggacttgcgacccagg 825
|||||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 634
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,783
Number of extensions: 4847
Number of successful extensions: 4847
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4846
Number of HSP's successfully gapped: 5
Length of query: 3064
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3046
Effective length of database: 8,109,745
Effective search space: 24702283270
Effective search space used: 24702283270
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)