BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10950 (UTR included)
(913 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1211_C1 192 7e-49
>BF14_1211_C1
Length = 1255
Score = 192 bits (97), Expect = 7e-49
Identities = 103/106 (97%)
Strand = Plus / Plus
Query: 658 tcaggagcgactcctccttcaacttcatggtgttcttcttcatattcctgttccagacct 717
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tcaggagcgactcctccttcaacttcatggtnnncttcttcatattcctgttccagacct 60
Query: 718 tcataaccctgatacagtccatcggtttcaccaatggcggttcctg 763
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcataaccctgatacagtccatcggtttcaccaatggcggttcctg 106
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 107,786
Number of extensions: 2673
Number of successful extensions: 2673
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2673
Number of HSP's successfully gapped: 1
Length of query: 913
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 896
Effective length of database: 8,119,229
Effective search space: 7274829184
Effective search space used: 7274829184
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)