BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15744 (UTR included)
(4978 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3134_C1 1758 0.0
>BF14_3134_C1
Length = 937
Score = 1758 bits (887), Expect = 0.0
Identities = 927/939 (98%), Gaps = 2/939 (0%)
Strand = Plus / Plus
Query: 3591 agttttcttaaaacaactagaaactatttggataaattttacacgtgttctatgatgccg 3650
||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||
Sbjct: 1 agttttcttaaaacaactagaaactattt-gnnnaattttac-ngtgttctatgatgccg 58
Query: 3651 tttgtaaaggacaagacggtgatacaatttgaaaaaatatgggatgagagtcttccttcg 3710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tttgtaaaggacaagacggtgatacaatttgaaaaaatatgggatgagagtcttccttcg 118
Query: 3711 ttagttgaagtggcacaggacacgagaaatgtcaatgttgatatattgaatttaaattat 3770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttagttgaagtggcacaggacacgagaaatgtcaatgttgatatattgaatttaaattat 178
Query: 3771 caaatctcgtgcacgctcttctaccagtgccattttaatcttaaatattcaaaaccattg 3830
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 caaatctcgtgcacgctcttctaccaatgccattttaatcttaaatattcaaaaccattg 238
Query: 3831 gacactctgtatgacatagattaccaatacatactggaagctctcggtggcaacgtagcg 3890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gacactctgtatgacatagattaccaatacatactggaagctctcggtggcaacgtagcg 298
Query: 3891 cagagaaatataagcatgacctgctcagaaaaattaatgacgccaagaatgaaatatcta 3950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cagagaaatataagcatgacctgctcagaaaaattaatgacgccaagaatgaaatatctt 358
Query: 3951 acaaagcttataagaacagctatagagactatcagttgtgttgaccatgaaaagtctaag 4010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 acaaagcttataagaacagctatagagactatcagttgtgttgaccatgaaaagtctaag 418
Query: 4011 gcctataacaatgaggaatgcttacaatggatcgaaaacattggagttttagccgatctg 4070
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcctacaacaatgaggaatgcttacaatggatcgaaaacattggagttttagccgatctg 478
Query: 4071 tggggcatagacactaattttgtaagacgacagcacgtcatcggattgtaccatgtggga 4130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tggggcatagacactaattttgtaagacgacagcacgtcatcggattgtaccatgtggga 538
Query: 4131 tacgatgaactggctgagaatattctaagttccgtaaccgaaccggaagttctcttatca 4190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tacgatgaactggctgagaatattctaagttccgtaaccgaaccggaagttctcttatca 598
Query: 4191 cctttgctagcgattacaatacaaagactgaagagaagtttagagaactgtaagaatcag 4250
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cctttactagcgattacaatacaaagactgaagagaagtttagagaactgtaagaatcag 658
Query: 4251 ccagaatggatcgtgtctatgccaccccagctatacaagcgtatgcagaatacgccattg 4310
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctgaatggatcgtgtctatgccaccccagctatacaagcgtatgcagaatacgccattg 718
Query: 4311 gacacaacgattcccgccaacccgtctctctccactactattctagtgttgcaaaaactg 4370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gacacaacgattcccgccaacccgtctctctccactactattctagtgttgcaaaaactg 778
Query: 4371 gtttcacagattacaaaaaaaacatcggatgctgaaagtacacaaaacgttaaattggct 4430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gtttcacagattacaaaaaaaacatcggatgctgaaagtacacaaaacgttaaattggct 838
Query: 4431 gaactcatcattgaaagctgcggacttttgatacgacataaattataaatattaagtata 4490
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 839 gaactcatcattgaaagctgcggacttttgatacgacataaattataaatattaattata 898
Query: 4491 tatttttatacagcaataaaaaaataataccacatatgt 4529
|||||||||||||||||||||||||||||||||||||||
Sbjct: 899 tatttttatacagcaataaaaaaataataccacatatgt 937
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 644,294
Number of extensions: 27608
Number of successful extensions: 27608
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 27607
Number of HSP's successfully gapped: 1
Length of query: 4978
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4960
Effective length of database: 8,109,745
Effective search space: 40224335200
Effective search space used: 40224335200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)