BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN05843 (UTR included)
         (2284 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_2723_C1                                                          325   2e-88

>BF14_2723_C1
          Length = 1388

 Score =   bits (164), Expect = 2e-88
 Identities = 180/185 (97%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2101 aatgaaccttatatgaaagtagtcacttctccgtatcgcactcttaacgtctcc-atcag 2159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||
Sbjct: 1    aatgaaccttatatgaaagtagtcacttctccgtatcgcactcttaacgtctccnnnnag 60

                                                                        
Query: 2160 acgctcgtctcgtcccgccggacgcgtcctagagcgactggagccaccagacgtctgttt 2219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   acgctcgtctcgtcccgccggacgcgtcctagagcgactggagccaccagacgtctgttt 120

                                                                        
Query: 2220 aagcacgagctgcatatccaggacaagggattgtactctgcgtttgagtttctggacatt 2279
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121  aagcacgagctgcatatccaggacaagggattgtactctgcgtttgagttactggacatt 180

                 
Query: 2280 tctaa 2284
            |||||
Sbjct: 181  tctaa 185


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,825
Number of extensions: 8339
Number of successful extensions: 8339
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8338
Number of HSP's successfully gapped: 1
Length of query: 2284
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2267
Effective length of database: 8,119,229
Effective search space: 18406292143
Effective search space used: 18406292143
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)