BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11867 (UTR included)
(1117 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2H08 90 9e-18
BF14_196_C1 76 1e-13
BF14_196_C2 72 2e-12
>BF01010A2H08
Length = 798
Score = 89.7 bits (45), Expect = 9e-18
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 608 ctgttccgacctgataacttcgtattcggacagagcggcgctggtaacaactgggccaag 667
|||||||| || || |||||||| ||||| ||| |||||| || |||||||||||||||
Sbjct: 468 ctgttccgcccggacaacttcgtcttcggtcagtccggcgcagggaacaactgggccaag 527
Query: 668 ggtcactacacagagggcgctgagctcgt 696
||||||||||||||||| ||||| |||||
Sbjct: 528 ggtcactacacagagggagctgaactcgt 556
>BF14_196_C1
Length = 781
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 623 aacttcgtattcggacagagcggcgctggtaacaactgggccaagggtcactacacagag 682
|||||||| ||||| ||| ||| || || ||||||||||||||||||||||||||||||
Sbjct: 310 aacttcgtcttcggtcagtccggagccggcaacaactgggccaagggtcactacacagag 369
Query: 683 ggcgctgagctcgt 696
|| ||||| |||||
Sbjct: 370 ggagctgaactcgt 383
>BF14_196_C2
Length = 1961
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 611 ttccgacctgataacttcgtattcggacagagcggcgctggtaacaactgggccaagggt 670
||||| ||||| |||||||| ||||| || ||| || || ||||||||||||||||||
Sbjct: 295 ttccgccctgacaacttcgtcttcggtcaatccggagccggcaacaactgggccaagggt 354
Query: 671 cactacacagagggcgctga 690
|||||||||||||| |||||
Sbjct: 355 cactacacagagggagctga 374
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 113,795
Number of extensions: 1853
Number of successful extensions: 1853
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1853
Number of HSP's successfully gapped: 3
Length of query: 1117
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1100
Effective length of database: 8,119,229
Effective search space: 8931151900
Effective search space used: 8931151900
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)