BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13934 (UTR included)
(2344 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A1B10 1423 0.0
BF01037B1D03 1296 0.0
>BF01023A1B10
Length = 815
Score = 1423 bits (718), Expect = 0.0
Identities = 784/805 (97%), Gaps = 2/805 (0%)
Strand = Plus / Plus
Query: 1394 ttctggtgataataccacggtggacaaactcgtcagagatatatacggaggagactacga 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttctggtgataataccacggtggacaaactcgtcagagatatatacggaggagactacga 70
Query: 1454 gaggttcggcctgaggggcgacctggtagccagcagcttcggccacatgtgttcgtcgca 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaggttcggcctgaggggcgacctggtagccagcagcttcggccacatgtgttcgtcgca 130
Query: 1514 gcgccgcgccaaggtctcccgcgaggacctcgcgcgtgcgacgctggtcaccatcaccaa 1573
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 131 gcgccgcgccaaggtctcccgcgaggacctcgcgcgcgcgacgctggtcaccatcaccaa 190
Query: 1574 caacataggctccatcgccaggctatgcgccagcaacgaacgactggagagggtggtgtt 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 caacataggctccatcgccaggctatgcgccagcaacgaacgactggagagggtggtgtt 250
Query: 1634 ctgcggcaacttcctccgagtgaaccctctgtccatgaagctcctgtcatacgccatgtc 1693
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 251 ctgcggcaacttcctccgagtgaaccctctgtccatgaagctcctatcatacgccatgtc 310
Query: 1694 ctactggtcgcggggggctctgaaggcactgttcctggagcacgagggttacttcggtgc 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctactggtcgcggggggctctgaaggcactgttcctggagcacgagggttacttcggtgc 370
Query: 1754 agtgggatgcttgctccgctacgacttaaagaaccacaggaaagaaaatgtatcgaggaa 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agtgggatgcttgctccgctacgacttaaagaaccacaggaaagaaaatgtatcgaggaa 430
Query: 1814 cgacacacccgagagacagatggatagatgaatatatgtatatgtgtatgtacatgtata 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgacacacccgagagacagatggatagatgaatatatgtatatgtgtatgtacatgtata 490
Query: 1874 tatatgtacatatatacatatacagataaataatattaaaaatattattaaaatatatac 1933
||||||||||| |||| ||||| | | | |||||||||||||||||||||||||||||||
Sbjct: 491 tatatgtacatgtatatatatatataaagataatattaaaaatattattaaaatatatac 550
Query: 1934 atccttatcatttaacatacaagcagctgtaaacaatcattattatgcaaaatatagaga 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atccttatcatttaacatacaagcagctgtaaacaatcattattatgcaaaatatagaga 610
Query: 1994 accttatccgtacttatgataagagaatggttttatttcattagatattcatatgacaaa 2053
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 611 accttatccgtacttatgataagagaatggttttatttcattagacatttatatgacaaa 670
Query: 2054 ctataccggtgacaaatgattctaatcgaagcgacctgttgtacgttgaccacagaatta 2113
| |||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 671 cgataccggtgatgaatagttctaatccaagcaacctgttgtacgttgaccacagaatta 730
Query: 2114 aacctctacaatac--atatatatatataggaatttttattttatacataattgttaata 2171
||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 731 aacctcttcaatacatatatatatatataggaatttttattttatatataattgttaata 790
Query: 2172 ttaggcacaaatttatatttatttt 2196
|||||||||||||||||||||||||
Sbjct: 791 ttaggcacaaatttatatttatttt 815
>BF01037B1D03
Length = 768
Score = 1296 bits (654), Expect = 0.0
Identities = 724/751 (96%), Gaps = 19/751 (2%)
Strand = Plus / Plus
Query: 498 tagatgcgactccatcgttgtgaaggctgcctcgcggcctgtcggcccgagcgcgccgcg 557
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tagatgcgactacatcgttgtgaaggctgcctcgcggcctgtcggcccgagcgcgccgcg 78
Query: 558 gcctcctctagacgaaatataaacaga------------------tcgagagcgtcgccg 599
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 79 gcctcctctagacgaaatataaacagaacaaatcaattgaagagatcgagagcgtcgccg 138
Query: 600 tacacgacgtctatcaaacaggaatccaaaatggcggagtccacccccccgacgcccccc 659
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tacacgacgtccatcaaacaggaatccaaaatggcggagtccacccccccgacgcccccc 198
Query: 660 gagaataacgcgccacccatgccgtggttcggtatggacatcggtggtaccctcaccaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gagaataacgcgccacccatgccgtggttcggtatggacatcggtggtaccctcaccaag 258
Query: 720 ctggtgtacttcgagcctcgcgagaacaacaggcgcgagctggacaaggagacggagatc 779
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctggtgtacttcgagccccgcgagaacaacaggcgcgagctggacaaggagacggagatc 318
Query: 780 ctgaagaatattaggagatacctcacaaggaactccgcgtacggcaagacgggcaggagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctgaagaatattaggagatacctcacaaggaactccgcgtacggcaagacgggcaggagg 378
Query: 840 gacggccacttgcagatggacaacgtgactatccgcgggcgccgcggcacgctccacttc 899
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gacggacacttgcagatggacaacgtgactatccgcgggcgccgcggcacgctccacttc 438
Query: 900 atccggttcccgaccagcgaggttggtgccttcctccagctggctcgctctaagggcatg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atccggttcccgaccagcgaggttggtgccttcctccagctggctcgctctaagggcatg 498
Query: 960 gccgctctcgtcaacacaatatacgctacaggcggaggagcctacaagttcgaagaggac 1019
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 gccgctctcgtcaacacaatatacgccacaggcggaggagcctacaagttcgaagaggac 558
Query: 1020 ttcatcaaggaggtgaacatgcgtctatccaagctagacgagctggacgctctaatagct 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttcatcaaggaggtgaacatgcgtctatccaagctagacgagctggacgctctaatagct 618
Query: 1080 ggtgtgctgttcgtggatgccatgaaccctcaggagtgttactactgggccccgccacaa 1139
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 619 ggtgtgctgttcgtggatgccatgaaccctcaggagtgttactactgggcaccgccacaa 678
Query: 1140 cccccacatgaagttgactcgccgccgtacctggaggcggctctgagtcagtacgtgagg 1199
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 679 cccccacatgaagttgactcgccgccgtacctggaggcggctctgnntcagtacgtgagg 738
Query: 1200 aagccgttcgacttctccaacccctacccct 1230
|||||||||||||||||| ||||||||||||
Sbjct: 739 aagccgttcgacttctcc-acccctacccct 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 323,077
Number of extensions: 12537
Number of successful extensions: 12537
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12532
Number of HSP's successfully gapped: 3
Length of query: 2344
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2327
Effective length of database: 8,119,229
Effective search space: 18893445883
Effective search space used: 18893445883
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)