BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11431 (UTR included)
(1465 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_973_C1 1608 0.0
BF14_973_C2 710 0.0
BF01025B1C06 593 e-169
>BF14_973_C1
Length = 1097
Score = 1608 bits (811), Expect = 0.0
Identities = 823/827 (99%)
Strand = Plus / Plus
Query: 138 gggcgcggtcgccgtcagtcgtcacggagtagagctggtgcttgtcatccggccgccatt 197
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcgcgttcgccgtcagtcgtcacggagtagagctggtgcttgtcatccggccgccatt 60
Query: 198 atttcatacgaattcataaatcatttaaagttttcgttgtctatacgcgttaaagtatcg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttcatacgaattcataaatcatttaaagttttcgttgtctatacgcgttaaagtatcg 120
Query: 258 tgtgtttaatactatcgtgagagtcaagagtattctcattatttgcaagtgtgtttaagt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgtttaatactatcgtgagagtcaagagtattctcattatttgcaagtgtgtttaagt 180
Query: 318 aaggcgaatcagtgtagagtggtgtagttaggttactgtgtgcgtgttaacattgtgtag 377
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 aaggcgaatcagtgtagagtggtgtagttaggttactgtgtgagtgttaacattgtgtag 240
Query: 378 ggtggctccggttaggccggggcggcaagacgcgatcggatcgtatgccgagggagcggt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtggctccggttaggccggggcggcaagacgcgatcggatcgtatgccgagggagcggt 300
Query: 438 gaaagcgcgcccggctcgggagtcggggcggacggcagccagggcaaaaaaacagctgcc 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaagcgcgcccggctcgggagtcggggcggacggcagccagggcaaaaaaacagctgcc 360
Query: 498 gacatggggtgtactcagtcggccgaagagcgcgccgctgctgcccggagcaaacagatt 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacatggggtgtactcagtcggccgaagagcgcgccgctgctgcccggagcaaacagatt 420
Query: 558 gagagaaacttgaaggaagatggcatccaagcctccaaagatatcaaactattgctgctg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagagaaacttgaaggaagatggcatccaagcctccaaagatatcaaactattgctgctg 480
Query: 618 ggtgctggcgagtctgggaagagtactatagttaaacaaatgaaaattatccacgagagc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgctggcgagtctgggaagagtactatagttaaacaaatgaaaattatccacgagagc 540
Query: 678 ggctttacaaatgaagatttcaagcagtaccggcccgtggtgtacagcaacacgatccag 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggctttacaaatgaagatttcaagcagtaccggcccgtggtgtacagcaacacgatccag 600
Query: 738 tcgctcgtcgccatcttacgcgccatgcccaacctcggcatcacctacgggaataaggat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcgctcgtcgccatcttacgcgccatgcccaacctcggcatcacctacgggaataaggat 660
Query: 798 cgcgagagtgacggtaagatggtgttcgacgtgatccagcggatggaagacactgagccg 857
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgcgagagcgacggtaagatggtgttcgacgtgatccagcggatggaagacactgagccg 720
Query: 858 ttcagtgaagagttgctagcagctatgaagaggctgtgggctgatgctggcgtccaggag 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcagtgaagagttgctagcagctatgaagaggctgtgggctgatgctggcgtccaggag 780
Query: 918 tgcttcggtcgctccaacgagtaccagctcaacgactcggctaaata 964
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgcttcggccgctccaacgagtaccagctcaacgactcggctaaata 827
>BF14_973_C2
Length = 782
Score = 710 bits (358), Expect = 0.0
Identities = 424/446 (95%)
Strand = Plus / Plus
Query: 519 gccgaagagcgcgccgctgctgcccggagcaaacagattgagagaaacttgaaggaagat 578
||||| |||||||||||| || || ||||| ||||| |||| ||| | |||||||||
Sbjct: 246 gccgaggagcgcgccgctctggcgcgcagcaagcagatagagaagaacctcaaggaagat 305
Query: 579 ggcatccaagcctccaaagatatcaaactattgctgctgggtgctggcgagtctgggaag 638
|||||||||||| |||| || ||||| || |||| || |||||||||||||||||||||
Sbjct: 306 ggcatccaagccgccaaggacatcaagctgctgctccttggtgctggcgagtctgggaag 365
Query: 639 agtactatagttaaacaaatgaaaattatccacgagagcggctttacaaatgaagatttc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agtactatagttaaacaaatgaaaattatccacgagagcggctttacaaatgaagatttc 425
Query: 699 aagcagtaccggcccgtggtgtacagcaacacgatccagtcgctcgtcgccatcttacgc 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aagcagtaccggcccgtggtgtacagcaacacgatccagtcgctcgtcgccatcttacgc 485
Query: 759 gccatgcccaacctcggcatcacctacgggaataaggatcgcgagagtgacggtaagatg 818
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 486 gccatgcccaacctcggcatcacctacgggaataaggatcgcgagagcgacggtaagatg 545
Query: 819 gtgttcgacgtgatccagcggatggaagacactgagccgttcagtgaagagttgctagca 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtgttcgacgtgatccagcggatggaagacactgagccgttcagtgaagagttgctagca 605
Query: 879 gctatgaagaggctgtgggctgatgctggcgtccaggagtgcttcggtcgctccaacgag 938
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 606 gctatgaagaggctgtgggctgatgctggcgtccaggagtgcttcggccgctccaacgag 665
Query: 939 taccagctcaacgactcggctaaata 964
||||||||||||||||||||||||||
Sbjct: 666 taccagctcaacgactcggctaaata 691
>BF01025B1C06
Length = 728
Score = 593 bits (299), Expect = e-169
Identities = 317/323 (98%)
Strand = Plus / Minus
Query: 1012 tgtatatggtgacagaatgttctatatctataactatcagtctagactaatgagtctgta 1071
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 728 tgtatatggtgacagaatgttctatatctataactttcagtctagactaatgagtctgta 669
Query: 1072 tatgatttgataaattattgaatttcagttctacgaaattaaaatatttatacgtctgtc 1131
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 668 tatgatttgataaattattgaatttctgttctacgaaattaaaatatttatacgtctgtc 609
Query: 1132 atatattatgttgtttacggtcttaggacataaaatcttaatctattttaactaaaatac 1191
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 608 atatattatgttgtttacggtcttagggcataaaatcttaatctattttaactaaaatac 549
Query: 1192 aagtggaatacaaaattttctatgttaatttctttgtcctggaatccaatctgaatcgca 1251
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 548 aagtggaatacaaaattttctatgtaaatttctttgtcctggaatccaatctgaatcgca 489
Query: 1252 gcggttcgttcggtatatacgtgggggtgacactgtaagtcagttcaccatgataccagg 1311
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcggttcgttcggtatgtatgtgggggtgacactgtaagtcagttcaccatgataccagg 429
Query: 1312 acacattatacttctggaacgcc 1334
|||||||||||||||||||||||
Sbjct: 428 acacattatacttctggaacgcc 406
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 152,885
Number of extensions: 2734
Number of successful extensions: 2734
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2734
Number of HSP's successfully gapped: 3
Length of query: 1465
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1448
Effective length of database: 8,119,229
Effective search space: 11756643592
Effective search space used: 11756643592
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)