BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11553 (UTR included)
(3940 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1G11 1622 0.0
BF01040A2E07 291 4e-78
>BF01042B1G11
Length = 826
Score = 1622 bits (818), Expect = 0.0
Identities = 824/826 (99%)
Strand = Plus / Plus
Query: 2171 agcttgcaggcttgcgccctccgtgatcactctctgcagactaaaccaggcaaccatgtt 2230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttgcaggcttgcgccctccgtgatcactctctgcagactaaaccaggcaaccatgtt 60
Query: 2231 ggctaaaaagaaacccgggagagttttagcgccacaaacaccgctagacaaactctcact 2290
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 ggctaaaaagaaacccgggagagttttagcgccgcaaacaccgctagacaaactctcact 120
Query: 2291 aactgtgaatctcattacgatggcggactacgaacgtcatcattacgacaaggagttgtt 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactgtgaatctcattacgatggcggactacgaacgtcatcattacgacaaggagttgtt 180
Query: 2351 ggcaaagacagcggaacggatcggcactttagaaataaatccggctgccgacctggagca 2410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcaaagacagcggaacggatcggcactttagaaataaatccggctgccgacctggagca 240
Query: 2411 aatgcgtgttcttatacaaaacatgatcaaagaatctcacatttattcgaatctcgttga 2470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgcgtgttcttatacaaaacatgatcaaagaatctcacatttattcgaatctcgttga 300
Query: 2471 ttggtggttcgttgattcggtgacagctgaacggttctttaggatcgataaagcgcagga 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttggtggttcgttgattcggtgacagctgaacggttctttaggatcgataaagcgcagga 360
Query: 2531 gaatcttcattatccgactgacatcggacacgaaaatatatatatactcgacgcagcgcc 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaatcttcattatccgactgacatcggacacgaaaatatatatatactcgacgcagcgcc 420
Query: 2591 cctgacacctgacacagagtcgactgtgcaccctgagacgacagcgacggcatccctcga 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctgacacctgacacagagtcgactgtgcaccctgagacgacagcgacggcatccctcga 480
Query: 2651 ccgcaccggtccatctgtgtcccttgacactacaacgggactgtcagtatctttggacat 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgcaccggtccatctgtgtcccttgacactacaacgggactgtcagtatctttggacat 540
Query: 2711 atcacagagcgtcgacacacccagcgctggagtgtctctggatgtaccagaatcacatgc 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcacagagcgtcgacacacccagcgctggagtgtctctggatgtaccagaatcacatgc 600
Query: 2771 tagtgaatccggtttcgcaagccctgctcggacttcagaagacttattgtcgccccaaac 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tagtgaatccggtttcgcaagccctgctcggacttcagaagacttattgtcgccccaaac 660
Query: 2831 accgccagcaaatttgggaacatcagccacaaggatgtcgaacatgcctgttaaatcagc 2890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accgccagcaaatttgggaacatcagccacaaggatgtcgaacatgcctgttaaatcagc 720
Query: 2891 actccaaccccctaaaataccatccatacaagactcaaattccccaccactctgcataag 2950
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 721 actccaaccccctaaaataccatccatacaagactcaaattccccaccactatgcataag 780
Query: 2951 cccacccgttaaggacatgcaaccaagtcgcgattctatttctaga 2996
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cccacccgttaaggacatgcaaccaagtcgcgattctatttctaga 826
>BF01040A2E07
Length = 831
Score = 291 bits (147), Expect = 4e-78
Identities = 156/159 (98%)
Strand = Plus / Plus
Query: 3782 ttttgtaaattgcgaataagataagataattaaaattcttttttaatggaataataagca 3841
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1 ttttgtaaattgcgaataagataagataactaaaattcttttttagtggaataataagca 60
Query: 3842 atttaaaaaatcccatcctcagtctgacttgcttgacattttataattctttcaagaaag 3901
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 atttaaaaaatcccatcctcagtctgacttgcttgacattttatgattctttcaagaaag 120
Query: 3902 aaaatcaatactgaaaaaattactcgtgcagtgtactgt 3940
|||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatcaatactgaaaaaattactcgtgcagtgtactgt 159
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 477,569
Number of extensions: 24452
Number of successful extensions: 24452
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 24452
Number of HSP's successfully gapped: 2
Length of query: 3940
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3922
Effective length of database: 8,109,745
Effective search space: 31806419890
Effective search space used: 31806419890
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)