BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14763 (UTR included)
(1287 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 101 3e-21
BF14_335_C2 94 7e-19
BF01056B2D01 80 1e-14
BF14_335_C4 80 1e-14
BF01016A2B02 78 4e-14
BF01044B1A07 72 2e-12
BF01049B1F01 70 1e-11
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 592 attcaccgtgctggtgccgggtccgtcgcgttgtagggagagcagcttcaacagtgcctg 651
||||||||||| |||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 391 attcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctg 450
Query: 652 ggacatgcgacccag 666
||| ||||||||||
Sbjct: 451 ggagttgcgacccag 465
>BF14_335_C2
Length = 1827
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 592 attcaccgtgctggtgccgggtccgtcgcgttgtagggagagcagcttcaacagtgcctg 651
||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct: 835 attcaccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtgcctg 894
Query: 652 gga 654
|||
Sbjct: 895 gga 897
>BF01056B2D01
Length = 728
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 584 ttccatgtattcaccgtgctggtgccgggtccgtcgcgttgtagggagagcagcttcaac 643
||||||| ||||||||||| |||||||||||| || | ||| |||||||| |||||||||
Sbjct: 95 ttccatgaattcaccgtgcgggtgccgggtccatcacattgcagggagaggagcttcaac 154
Query: 644 agtgcctgggac 655
|| |||||||||
Sbjct: 155 agcgcctgggac 166
>BF14_335_C4
Length = 1491
Score = 79.8 bits (40), Expect = 1e-14
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 575 ctctcagtgttccatgtattcaccgtgctggtgccgggtccgtcgcgttgtagggagagc 634
||||||| ||||||| ||||||||||| | ||| ||| || |||||||| ||| ||||
Sbjct: 1354 ctctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttgcagg-agagg 1296
Query: 635 agcttcaacagtgcctgggacatgcgacccag 666
||||||||||||||||||||| ||||||||||
Sbjct: 1295 agcttcaacagtgcctgggacttgcgacccag 1264
>BF01016A2B02
Length = 780
Score = 77.8 bits (39), Expect = 4e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 592 attcaccgtgctggtgccgggtccgtcgcgttgtagggagagcagcttcaacagtgcctg 651
||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct: 197 attcaccgtgctg-tgccgggtcccgcgcgttgaagggagaggagcttcaacagtgcctg 255
Query: 652 gga 654
|||
Sbjct: 256 gga 258
>BF01044B1A07
Length = 806
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 576 tctcagtgttccatgtattcaccgtgctggtgccgggtccgtcgcgttgtagggagagca 635
|||||| |||| ||| ||||||||||| |||| ||||||| |||||| | |||||||| |
Sbjct: 438 tctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagggagagga 497
Query: 636 gcttcaacagtgcctgggac 655
|||||||| ||| |||||||
Sbjct: 498 gcttcaactgtgtctgggac 517
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 620 cgttgtagggagagcagcttcaacagtgcctgggacatgcgacccag 666
||||| |||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccag 633
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 135,241
Number of extensions: 2612
Number of successful extensions: 2612
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2610
Number of HSP's successfully gapped: 7
Length of query: 1287
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1270
Effective length of database: 8,119,229
Effective search space: 10311420830
Effective search space used: 10311420830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)