BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06883 (UTR included)
(5248 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1E06 1400 0.0
>BF01054A1E06
Length = 782
Score = 1400 bits (706), Expect = 0.0
Identities = 739/751 (98%), Gaps = 8/751 (1%)
Strand = Plus / Plus
Query: 3382 aagcatcagctacgatcctcataggcattctagtgtcgatgtattacacgtggaaaatga 3441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aagcatcagctacgatcctcataggcattctagtgtcgatgtattacacgtggaaaatga 72
Query: 3442 ccctcgtgtccctggtgtctgtgcccatggtgattatagcggtggtgcttgaaggacggg 3501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccctcgtgtccctggtgtctgtgcccatggtgattatagcggtggtgcttgaaggacggg 132
Query: 3502 tgctggcagaaggtatcgcggccatcagagaggcctccaacaaagctacgacgatcgcca 3561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgctggcagaaggtatcgcggccatcagagaggcctccaacaaagctacgacgatcgcca 192
Query: 3562 ccgaggccatcactaacataaggacggtgtgtgctttct--------gcggcgaggaggg 3613
|||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 193 ccgaggccatcactaacatacggacggtgtgtgctttcttgtgtcaggcggcgaggaggg 252
Query: 3614 gacgttgtcgcggtacaaagacgctgggggagcagctcgggtcgcagctcgctccagctt 3673
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 253 gacgttgtcgcggtacaaagacgctgggggtgcagctcgggtcgcagctcgctccagctt 312
Query: 3674 gaggtggcggggagctgtgttcgctttcggacaaaccgcgcctgtagcgggctacgcgct 3733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaggtggcggggagctgtgttcgctttcggacaaaccgcgcctgtagcgggctacgcgct 372
Query: 3734 cgctctgtggtacggcggagtgttggtcgctaatggagaagttccttataaagatgtcat 3793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgctctgtggtacggcggagtgttggtcgctaatggagaagttccttataaagatgtcat 432
Query: 3794 taaggtgtctgaagctttgatatttggagcgtggatgatgggtcaagcgctggctttcgc 3853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 taaggtgtctgaagctttgatatttggagcgtggatgatgggtcaagcgctggctttcgc 492
Query: 3854 acccaatttcggagctgcagtactggcggcggggcgagtcatgacattacttgcaagaca 3913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acccaatttcggagctgcagtactggcggcggggcgagtcatgacattacttgcaagaca 552
Query: 3914 accgctcgtcgctgatactcacgcgccctccgttcctgaagcttacgtagctgaaggtaa 3973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 accgctcgtcgctgatactcacgcgccctccgttcctgaagcttacgtagctgaaggtaa 612
Query: 3974 aatccaatacaaaaacataaaattccgatatccgactcggcgtgaggtccaggtacttcg 4033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aatccaatacaaaaacataaaattccgatatccgactcggcgtgaggtccaggtacttcg 672
Query: 4034 cgggttgtccctctcagtgtccatgggccgtcgggtagcactcgtgggccccagcggttg 4093
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 673 cggattgtccctctcagtgtccatgggccgccgggtagcactcgtgggccccagcggttg 732
Query: 4094 tgggaagtccacgctcatacagctactgcag 4124
|||||||||||||||||||||||||||||||
Sbjct: 733 tgggaagtccacgctcatacagctactgcag 763
Score = 256 bits (129), Expect = 3e-67
Identities = 132/133 (99%)
Strand = Plus / Plus
Query: 5116 tgtgtcaggcggcgaggaggggacgttgtcgcggtacaaagacgctgggggagcagctcg 5175
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 232 tgtgtcaggcggcgaggaggggacgttgtcgcggtacaaagacgctgggggtgcagctcg 291
Query: 5176 ggtcgcagctcgctccagcttgaggtggcggggagctgtgttcgctttcggacaaaccgc 5235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggtcgcagctcgctccagcttgaggtggcggggagctgtgttcgctttcggacaaaccgc 351
Query: 5236 gcctgtagcgggc 5248
|||||||||||||
Sbjct: 352 gcctgtagcgggc 364
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 466,076
Number of extensions: 8290
Number of successful extensions: 8290
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8290
Number of HSP's successfully gapped: 3
Length of query: 5248
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5230
Effective length of database: 8,109,745
Effective search space: 42413966350
Effective search space used: 42413966350
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)