BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19391 (UTR included)
(4969 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1B09 1501 0.0
>BF01039A1B09
Length = 772
Score = 1501 bits (757), Expect = 0.0
Identities = 770/773 (99%), Gaps = 1/773 (0%)
Strand = Plus / Plus
Query: 2404 cagacaataaacttagaactgttgagttagcagcatttacattacctcatattccaaaac 2463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagacaataaacttagaactgttgagttagcagcatttacattacctcatattccaaaac 60
Query: 2464 atagaacattgccgaaattttttattggaaataacccatttatatgcaactgtcacatga 2523
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagaacattgccgaaactttttattggaaataacccatttatatgcaactgtcacatga 120
Query: 2524 tctggttgcaaaagattaacctttggaaccatatgagacaatatccgagatttgcagact 2583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctggttgcaaaagattaacctttggaaccatatgagacaatatccgagatttgcagact 180
Query: 2584 tggagtcggttacttgtgaagtcgttagcaacaagtacggtggaaaggcgaatttaatgg 2643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggagtcggttacttgtgaagtcgttagcaacaagtacggtggaaaggcgaatttaatgg 240
Query: 2644 atgttcctgaaacacagttcctttgttcttatgaaactcattgttcttcaagttgtttct 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttcctgaaacacagttcctttgttcttatgaaactcattgttcttcaagttgtttct 300
Query: 2704 gttgtgacttcgaagcttgcgattgtaaaatgacttgtccggaaggctgctcttgctttc 2763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgtgacttcgaagcttgcgattgtaaaatgacttgtccggaaggctgctcttgctttc 360
Query: 2764 atgacagtaattggaattcaaatgttattgactgctcaaatgtaggatatactgaaatac 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgacagtaattggaattcaaatgttattgactgctcaaatgtaggatatactgaaatac 420
Query: 2824 cagaaaaaatacccatggacgctacggaattgtatcttgatggaaatgattttgggacat 2883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagaaaaaatacccatggacgctacggaattgtatcttgatggaaatgattttgggacat 480
Query: 2884 taggcagtcacttatttataggtaaaaagaaattacataagttatatttgaataacagta 2943
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 taggcagtcacttatttataggtaaaaagaaattacataagttatatctgaataacagta 540
Query: 2944 atattgccactatggacaacgataccttcaatggattacattcactaaacgttctgcatt 3003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atattgccactatggacaacgataccttcaatggattacattcactaaacgttctgcatt 600
Query: 3004 tagaaaataaccacttaactgaattagctggcggcgaattctcacaaacaaagcatttac 3063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tagaaaataaccacttaactgaattagctggcggcgaattctcacaaacaaagcatttac 660
Query: 3064 gagaattgtatttaaacgataacttcttaacaagtgtagggaattcgacttttgaaaatt 3123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 661 gagaattgtatttaaacgataacttcttaacaagtgtagggaa-tcgacttttgaaaatt 719
Query: 3124 tgtcttcattacgtgtagttcatcttcaaggcaataaaatacttgatcttgat 3176
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tgtcttcattacgtgtagttcatcttcaaggcaataaaatacttgatcttgat 772
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 610,614
Number of extensions: 11606
Number of successful extensions: 11606
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11605
Number of HSP's successfully gapped: 1
Length of query: 4969
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4951
Effective length of database: 8,109,745
Effective search space: 40151347495
Effective search space used: 40151347495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)