BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19472 (UTR included)
(1900 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1E04 1455 0.0
>BF01055B1E04
Length = 799
Score = 1455 bits (734), Expect = 0.0
Identities = 778/790 (98%), Gaps = 2/790 (0%)
Strand = Plus / Plus
Query: 567 aataaaagcgctgtttttccgctccaagtcttaggttttgaagtggatgccataaacact 626
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 11 aataaaagcgctgtttttccgctccaagtcttaggttttgaggtggatgccataaacact 70
Query: 627 gttcagttttcaacacacactggttacaagcatgttaaaggcacaatcctaaaa-aatga 685
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 71 gttcagttttcaacacacactggttacaagcatgtcaaaggcacaatcctaaaaaaatga 130
Query: 686 ggaaatggctgaactaatggaagggctggctcttaatgaagttgactattatacacattt 745
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 ggaaatggctgaactaatggaagggctggctcttaatgaagtcgactattatacacattt 190
Query: 746 cttgacagggtattctagatctccagattctttaaaacaaatagccagtataattaccaa 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cttgacagggtattctagatctccagattctttaaaacaaatagccagtataattaccaa 250
Query: 806 attgaaacagaagaatcaaaacttaatttatgtatgtgacccagtaatgggcgacaatgg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attgaaacagaagaatcaaaacttaatttatgtatgtgacccagtaatgggcgacaatgg 310
Query: 866 caagatgtatgtgccggatgaagtattgcctgtgtacagagacatactggtaccactagc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caagatgtatgtgccggatgaagtattgcctgtgtacagagacatactggtaccactagc 370
Query: 926 cgatatactaacaccaaatcagtttgaagctgaacaaatcaccggattaaccatgaatga 985
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 371 cgatatactaacaccaaatcagtttgaagctgaacaaatcaccggattgaccatgaatga 430
Query: 986 tctggacggtgctttaaaaatcattgacgctttacatggtaagggagtcaagactgtggt 1045
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 431 tctggatggtgctttaaaaatcattgacgctttacacggtaagggagtcaagactgtggt 490
Query: 1046 gttgtctagcacagaccttggagatgaggagaacatgattggcattgctagtaacaaaga 1105
|||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 491 gttgtctagcacagacctcggagatgaggagaatatgattggcattgctagtaataaaga 550
Query: 1106 ttcttgctacaaaatcgtcataccgaaattcggtgcaacgtttacgggtactggagactt 1165
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 551 ttcttgctacaaaatcgtcataccgaaattcggtgcaacg-ttacgggtactggagactt 609
Query: 1166 atttgccgctctttttatggcgtggtctcacaaaacgaataagaatctaaaactgacgct 1225
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 610 atttgccgctctttttatggcttggtctcacaaaacgaataagaatctaaaactgacgct 669
Query: 1226 ggaaaaaacaattgcgacgctccaacacatcgtcaaggacacttttgataaagcgagagc 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ggaaaaaacaattgcgacgctccaacacatcgtcaaggacacttttgataaagcgagagc 729
Query: 1286 tgtgcaaccgacgggaaaagtttcttcagcactcatagaattgagactcgtccaaaataa 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tgtgcaaccgacgggaaaagtttcttcagcactcatagaattgagactcgtccaaaataa 789
Query: 1346 aacaacgatc 1355
||||||||||
Sbjct: 790 aacaacgatc 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 306,588
Number of extensions: 12029
Number of successful extensions: 12029
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12027
Number of HSP's successfully gapped: 1
Length of query: 1900
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1883
Effective length of database: 8,119,229
Effective search space: 15288508207
Effective search space used: 15288508207
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)