BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06556 (UTR included)
(2914 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1A12 450 e-126
BF01004X1D12 309 1e-83
>BF01012A1A12
Length = 682
Score = 450 bits (227), Expect = e-126
Identities = 236/239 (98%)
Strand = Plus / Plus
Query: 1873 ccaggcttcaattagaagaacgcctggcccaagaagcgcgggagaagagaatggatgaaa 1932
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 ccaggcttcaattagaggaacgcctggcacaagaagcgcgggagaagagaatggatgaaa 503
Query: 1933 gaaaagaagaaagagcgagggagagaagtttatacaatgacgtcaggaagagcccaaccg 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaaagaagaaagagcgagggagagaagtttatacaatgacgtcaggaagagcccaaccg 563
Query: 1993 acgaaaggaagagggaacaagtacatttcatactgggaggggacaatgttaactggacgg 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acgaaaggaagagggaacaagtacatttcatactgggaggggacaatgttaactggacgg 623
Query: 2053 gcgaggacctgacccgtgcgtcccagtcgcagtcccaacctcaactgcgttcgtccata 2111
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcgaggacttgacccgtgcgtcccagtcgcagtcccaacctcaactgcgttcgtccata 682
Score = 178 bits (90), Expect = 3e-44
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1784 agcgacagacactttgggctggcgggaggactcgtcgggcagtgaagcagactcacccca 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 agcgacagacactttgggctggcgggaggactcgtcgggcagtgaagcagactcacccca 335
Query: 1844 ctaccctctagatctcagactggccgaagccagg 1877
||||||||||||||| ||||||||||||||||||
Sbjct: 336 ctaccctctagatctaagactggccgaagccagg 369
>BF01004X1D12
Length = 664
Score = 309 bits (156), Expect = 1e-83
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 2755 taatgactcgtccggttgtataatgtatatttcaatgtttacacgatagccaattataca 2814
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taatgactcgtccggatgtataatgtatatttcaatgtttacacgatagccaattataca 394
Query: 2815 ttgtataaatgtaaatatacttacgaccatatcgcatcattccctgtttttttttcgtag 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttgtataaatgtaaatatacttacgaccatatcgcatcattccctgtttttttttcgtag 454
Query: 2875 tttgatagcgatatattatgtgccccatagatttaaaata 2914
||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tttgatagcgatatattatgtgccccatagatttaaaata 494
Score = 200 bits (101), Expect = 9e-51
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 2645 cctatgacatagctcatgtatttccaatttagatgttttaatgaaccggatatatgaata 2704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 cctatgacatagctcatgtatttccaatttagatgttttaatgaaccggatatatgaata 67
Query: 2705 atatatgttcctcaacactagtggattgttatggacgccaatttgttcg 2753
||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 68 atatatgttccccgacactagtggattgttatggacgccaatttgttcg 116
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,245
Number of extensions: 7291
Number of successful extensions: 7291
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7291
Number of HSP's successfully gapped: 4
Length of query: 2914
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2896
Effective length of database: 8,109,745
Effective search space: 23485821520
Effective search space used: 23485821520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)