BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12082 (UTR included)
(5359 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2462_C1 2543 0.0
>BF14_2462_C1
Length = 1303
Score = 2543 bits (1283), Expect = 0.0
Identities = 1295/1299 (99%)
Strand = Plus / Plus
Query: 3688 caggctcgggattcctaacatcaatgaaaataacaaaggaggacatgtggatccgtacgt 3747
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 caggctcaggattcctaacatcaatgaaaataacaaaggaggacatgtggatccgtacgt 64
Query: 3748 atgggagattatatcaaaagctatgctcaacaacctgtgaaattccgataggcatctatc 3807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgggagattatatcaaaagctatgctcaacaacctgtgaaattccgataggcatctatc 124
Query: 3808 gtactcaggatacaagtctggccgaccaggcgcaccacgtgagtatgtcgcctcgcggcc 3867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtactcaggatacaagtctggccgaccaggcgcaccacgtgagtatgtcgcctcgcggcc 184
Query: 3868 cgtcagggtggttctggccaggcttcgcggggatgcgaccatcgcgcgcatcgcaggctt 3927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cgtcagggtggttctggccaggcttcgcggggatgcgaccatcgcgcgcatcgcaggctt 244
Query: 3928 cggggaatgcgggggtgaacggagacagtgggtcctcggagaggggaaggacgcgatcgc 3987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cggggaatgcgggggtgaacggagacagtgggtcctcggagaggggaaggacgcgatcgc 304
Query: 3988 gtcgcagccccaccggttgcttgagcggatgctacggagagcgtacgccagcgtattcaa 4047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtcgcagccccaccggttgcttgagcggatgctacggagagcgtacgccagcgtattcaa 364
Query: 4048 ccagtttggcagatgaagcaagagataatcatgcgcaacaaatcgaaagagctgaaattg 4107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccagtttggcagatgaagcaagagataatcatgcgcaacaaatcgaaagagctgaaattg 424
Query: 4108 ctaatcttgtaagatctagaatggaatctctgaatttaactggaattgactatgatgatg 4167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 425 ctaatcttgtaagatctagaatggaatctttgaatttaactggaattgactatgatgatg 484
Query: 4168 ttagtgagaaacgaaacagcttatcatacgttattatcaacccaagttgtgatctcaatt 4227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttagtgagaaacgaaacagcttatcatacgttattatcaacccaagttgtgatctcaatt 544
Query: 4228 tacaggaaggcgatattatatatcttgtacgtccttcacctttctctgcccaaaagacct 4287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tacaggaaggcgatattatatatcttgtacgtccttcacctttctctgcccaaaagacct 604
Query: 4288 ttgagagacataacagccgacgcaagtcaaacatcagtttttgctcaggagctcttattc 4347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttgagagacataacagccgacgcaagtcaaacatcagtttttgctcaggagctcttattc 664
Query: 4348 aggctgctgccggtagccgtcgtggctccgctctagcagggctcaccagcctctccccta 4407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aggctgctgccggtagccgtcgtggctccgctctagcagggctcaccagcctctccccta 724
Query: 4408 gggctccgccactcacctgcacaaaagccaattcactatccctacctgatagtcctacaa 4467
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 725 gggctccaccactcacctgcacaaaagccaactcactatccctacctgatagtcctacaa 784
Query: 4468 tcattaccgatttccgaggacgttctaactctttgcgtgtcgtagatgacattttgctcc 4527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tcattaccgatttccgaggacgttctaactctttgcgtgtcgtagatgacattttgctcc 844
Query: 4528 gccgctcaaactccttgcgtcaaggtcttgggacacctggtaattcgcgacgtcgaaaga 4587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gccgctcaaactccttgcgtcaaggtcttgggacacctggtaattcgcgacgtcgaaaga 904
Query: 4588 gcagtcttgaagagattggaatttctcactttaattcacttttacaacatcaacaacaac 4647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gcagtcttgaagagattggaatttctcactttaattcacttttacaacatcaacaacaac 964
Query: 4648 aacagcaacagaatgcaaatgctattaagatagctctgaatgggagtattggtcttgaag 4707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 aacagcaacagaatgcaaatgctattaagatagctctgaatgggagtattggtcttgaag 1024
Query: 4708 tgacaccaccagatgagggacctatggatcggatgggagggcatctaggtggatatcaag 4767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tgacaccaccagatgagggacctatggatcggatgggagggcatctaggtggatatcaag 1084
Query: 4768 atatggccgccgcattaccaccgacagcatcgcaatcaggattgccaccagattttgccg 4827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 atatggccgccgcattaccaccgacagcatcgcaatcaggattgccaccagattttgccg 1144
Query: 4828 atccgcagcatttgcaggggacaatcgtatgataccatctcatgtggggacgacgactta 4887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 atccgcagcatttgcaggggacaatcgtatgataccatctcatgtggggacgacgactta 1204
Query: 4888 gttccgtagtcagaaataagtggacctaagctggatgaagctagatcaacttatttcgga 4947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 gttccgtagtcagaaataagtggacctaagctggatgaagctagatcaacttatttcgga 1264
Query: 4948 acccattttcaactcgtagcgtctctactatgcacgtac 4986
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 acccattttcaactcgtagcgtctctactatgcacgtac 1303
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 498,322
Number of extensions: 8771
Number of successful extensions: 8771
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8771
Number of HSP's successfully gapped: 1
Length of query: 5359
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5341
Effective length of database: 8,109,745
Effective search space: 43314148045
Effective search space used: 43314148045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)