BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04971 (UTR included)
(3424 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B2G11 1324 0.0
>BF01059B2G11
Length = 713
Score = 1324 bits (668), Expect = 0.0
Identities = 701/713 (98%)
Strand = Plus / Plus
Query: 1839 attggtcctgttggaccagaaggaccccctggtttaaggggactggctggaccaactgga 1898
|||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 attggttctgctggaccagaaggaccccctggtnnnaggggactggctggaccaactgga 60
Query: 1899 gatgttggagcacctggtgttatgggaccaatgggtgtaccaggacctagcggatccccc 1958
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 61 gatgttggagcacctggtgttatgggaccaatgggtgtaccaggacctaccggatcgccc 120
Query: 1959 ggccaacaaggaataaaaggagaaaaggggaataggggagcgaaaggtcatactggtgat 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccaacaaggaataaaaggagaaaaggggaataggggagcgaaaggtcatactggtgat 180
Query: 2019 acgggaaatattggaattaaaggagaccaaggcgaaattggaaaacagggaccaacaggt 2078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgggaaatattggaattaaaggagaccaaggcgaaattggaaaacagggaccaacaggt 240
Query: 2079 ccaataggtcctatggggccaaaaggagacacaggtccaattgggcctcccggatccaaa 2138
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ccaataggtcctatggggccaaaaggagacacaggtcccattgggcctcccggatccaaa 300
Query: 2139 ggagatgtaggaccggctgggctggctggacttgagggacctctgggcccaaaaggcacg 2198
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagatgtaggaccggctggactggctggacttgagggacctctgggcccaaaaggcacg 360
Query: 2199 gcaggacctgaaggtcgccccggtctacccggccctcccggtgctccaggacctccaggt 2258
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgggacctgaaggtcgccccggtctacccggccctcccggtgctccaggacctccaggt 420
Query: 2259 cctcccgcgccaatccctcagctaccttctgatctgttcatgtccagtagacgaaggcga 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctcccgcgccaatccctcagctaccttctgatctgttcatgtccagtagacgaaggcga 480
Query: 2319 agtattgaaactgaatctacggaaaccgctactgaagatagttatgaagaagaggaaatc 2378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtattgaaactgaatctacggaaaccgctactgaagatagttatgaagaagaggaaatc 540
Query: 2379 gaatggactcgtgagataatggctggcgtattagcagctcgaggaacgctggatgcggcc 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatggactcgtgagataatggctggcgtattagcagctcgaggaacgctggatgcggcc 600
Query: 2439 cgccgaccgcgtggtactcgctccaacccagcgctgtcatgcagggacttacgaacatct 2498
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 601 cgccgaccgcgtggtactcgctccaacccagcgctgtcgtgcagggacttgcgaacatct 660
Query: 2499 catgctaatttaactgatggtttctactggatagatgctcgtgggggttctgg 2551
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catgctaatttaactgatggtttctactggatagatgctcgtgggggttctgg 713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,543
Number of extensions: 6572
Number of successful extensions: 6572
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6571
Number of HSP's successfully gapped: 1
Length of query: 3424
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3406
Effective length of database: 8,109,745
Effective search space: 27621791470
Effective search space used: 27621791470
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)