BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16996 (UTR included)
(1513 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1789_C1 1146 0.0
>BF14_1789_C1
Length = 801
Score = 1146 bits (578), Expect = 0.0
Identities = 591/594 (99%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 428 aattaagtttattgttaaaatctagtatttatattaggatagtactctcgggttgctaaa 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattaagtttattgttaaaatctagtatttatattaggatagtactctcgggttgctaaa 60
Query: 488 aagaaatttagcaatgttgctgcctttgttgaatgcgttttggaatgaggatgtctggtt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaaatttagcaatgttgctgcctttgttgaatgcgttttggaatgaggatgtctggtt 120
Query: 548 gccgcctaatacaacatgggctgatctggcgcccggaccagataaggcagtaatttatac 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcctaatacaacatgggctgatctggcgcccggaccagataaggcagtaatttatac 180
Query: 608 ggaccacaggcatgtcttttttccgataccgttagcactgg-tgttcataactcttcgct 666
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ggaccacaggcatgtcttttttccgataccgttagcactggatgttcataactcttcgct 240
Query: 667 atatattagaaagatttgtatttgcaccgtttggacgatacctcggtattaaggatgtga 726
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 atatattagaaagatttgtatttgcaccgtttggacggtacctcggtattaaggatgtga 300
Query: 727 agcctagaaaaccaccatccaacccaaagcttgaagttgcatataaaacttctccgagga 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcctagaaaaccaccatccaacccaaagcttgaagttgcatataaaacttctccgagga 360
Query: 787 ccaaacagcaaatatgcagcctcgcgaaacagttggatatgtcggagcgccaggtggaga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaaacagcaaatatgcagcctcgcgaaacagttggatatgtcggagcgccaggtggaga 420
Query: 847 ggtggcttcgaaagcgcaagtgccaggacaaaccctcgaccctggttaaattctgcgaga 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtggcttcgaaagcgcaagtgccaggacaaaccctcgaccctggttaaattctgcgaga 480
Query: 907 acatgtggaagtgcaccttctacatctgtaacttcatttttggtctcatcgtactgtggg 966
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 acatgtggaagtgcaccttctacatctgtaacttcatttttggtctcatcggactgtggg 540
Query: 967 acaaggtctggctttgggatatagaccaatgttatctgggctatccccatcagg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaggtctggctttgggatatagaccaatgttatctgggctatccccatcagg 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,910
Number of extensions: 4676
Number of successful extensions: 4676
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4675
Number of HSP's successfully gapped: 1
Length of query: 1513
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1496
Effective length of database: 8,119,229
Effective search space: 12146366584
Effective search space used: 12146366584
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)