BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22313 (UTR included)
(1423 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B1B04 418 e-116
BF14_333_C1 107 5e-23
>BF01041B1B04
Length = 775
Score = 418 bits (211), Expect = e-116
Identities = 214/215 (99%)
Strand = Plus / Minus
Query: 598 aggaatttgtgactggattgtcagtattatcaagaggaacgctcgaagaaaaattaaaat 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aggaatttgtgactggattgtcagtattatcaagaggaacgctcgaagaaaaattaaaat 618
Query: 658 ggaccttctctttatatgacatcaacggcgatggttacataactaaagaagaaatgactg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggaccttctctttatatgacatcaacggcgatggttacataactaaagaagaaatgactg 558
Query: 718 aaattgtgactgctatttatgatcttatgggaaaaatagtagaaccgatgatcgatgacg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaattgtgactgctatttatgatcttatgggaaaaatagtagaaccgatgatcgatgacg 498
Query: 778 aggctgtacgagaaaaagttgaaaggatgtttcag 812
| |||||||||||||||||||||||||||||||||
Sbjct: 497 aagctgtacgagaaaaagttgaaaggatgtttcag 463
Score = 262 bits (132), Expect = 1e-69
Identities = 141/144 (97%)
Strand = Plus / Minus
Query: 811 agaaaatggatctgaaccgcgatggtgtgttaacattggacgagtttctcgactgctgcc 870
||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 203 agaaaatggatctgaaccgcgatggtgtgttgacgttggacgagtttctcgactgttgcc 144
Query: 871 ttcgcgatgaggacatctcgcgctctatgggcgtgtttgacagcaacttctgacgccccg 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ttcgcgatgaggacatctcgcgctctatgggcgtgtttgacagcaacttctgacgccccg 84
Query: 931 ccaggcgtgtgcgacgctggcctt 954
||||||||||||||||||||||||
Sbjct: 83 ccaggcgtgtgcgacgctggcctt 60
Score = 125 bits (63), Expect = 2e-28
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 1023 ccttaacgtactattattttgacataatattcaaacaataattttgattacccccgttcc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccttaacgtactattattttgacataatattcaaacaataattttgattacccccgttcc 4
Query: 1083 gtt 1085
|||
Sbjct: 3 gtt 1
>BF14_333_C1
Length = 1307
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 gatatgaatctaaaataattacagatttacataagtaatttctttcatatgttattttta 60
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 1246 gatatgaatctaaaataattacagatttacataagtaatttttttcataagttattttta 1305
Query: 61 at 62
||
Sbjct: 1306 at 1307
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,576
Number of extensions: 9236
Number of successful extensions: 9236
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9236
Number of HSP's successfully gapped: 4
Length of query: 1423
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1406
Effective length of database: 8,119,229
Effective search space: 11415635974
Effective search space used: 11415635974
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)