BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08121 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2E08 1150 0.0
>BF01013A2E08
Length = 801
Score = 1150 bits (580), Expect = 0.0
Identities = 595/600 (99%)
Strand = Plus / Plus
Query: 843 cctggcactattagatcactctatggaactgatcctgtcagaaattgtgcacacgcctca 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 cctggcactattagatcactctatggaactgatcctgtcagaaattgtgcacacgcctca 94
Query: 903 agtgacttagaatctgctgcagaaaacatagaatatttttttccaccaccaccgatgact 962
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 95 agtgacttagaatctgctgcagaaaatatagaatattttttcccaccaccaccgatgact 154
Query: 963 tccattcggttgcgtctaacagctactttgtccaattgtacactgtgtatagtcaaacct 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tccattcggttgcgtctaacagctactttgtccaattgtacactgtgtatagtcaaacct 214
Query: 1023 catgctataagagagggtaagctgggagctgccatggaagctattgatgaaggaggcttt 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 catgctataagagagggtaagctgggagctgccatggaagctattgatgaaggaggcttt 274
Query: 1083 gatattactgcatttaacatgttcatagttgagaacattaatgctgcagaattctatgaa 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gatattactgcatttaacatgttcatagttgagaacattaatgctgcagaattctatgaa 334
Query: 1143 gtctataaaggcattgttcaagagtataagggtatggtggaggaattggcaagcgggcct 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtctataaaggcattgttcaagagtataagggtatggtggaggaattggcaagcgggcct 394
Query: 1203 tgtgttgccatggagatagtcgctaaaaataaaaatgtcaacactgctgtggagtttagg 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgtgttgccatggagatagtcgctaaaaataaaaatgtcaacactgctgtggagtttagg 454
Query: 1263 aaactagttggcccatcagatcctgaaatcgctagactattgcgaccgcacacattgaga 1322
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 455 aaactagttggcccatcagatcctgaaatcgcgagactattgcgaccgcacacattgaga 514
Query: 1323 gcgaaattgggcaaaacaaaagtacaaaacgctattcactgtagcgatctcgctgaagat 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gcgaaattgggcaaaacaaaagtacaaaacgctattcactgtagcgatctcgctgaagat 574
Query: 1383 ggtttacttgaagttgaatatttcttcaagatattggaactttgagtttagtgatttatg 1442
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggtctgcttgaagttgaatatttcttcaagatattggaactttgagtttagtgatttatg 634
Score = 333 bits (168), Expect = 6e-91
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1531 gaaatcaaacatatatatgaaattagctttatttattcaaggaaataagttgctcacctt 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaaatcaaacatatatatgaaattagctttatttattcaaggaaataagttgctcacctt 693
Query: 1591 caagacaacaattaccttactgccgcatcatttacacgtccgtgctttttaatgaacgca 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 caagacaacaattaccttactgccgcatcatttacacgtccgtgctttttaatgaacgca 753
Query: 1651 gtgaatcctgataaataataaattatatgtaattgactataacattga 1698
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gtgaatcctgataaataataaattatatgtaattgactataacattga 801
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,180
Number of extensions: 5429
Number of successful extensions: 5429
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5429
Number of HSP's successfully gapped: 2
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)