BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20346 (UTR included)
(1738 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B2C01 1334 0.0
>BF01011B2C01
Length = 739
Score = 1334 bits (673), Expect = 0.0
Identities = 694/701 (99%)
Strand = Plus / Plus
Query: 232 ataaaatatatactcgtaatacaacaaaaataatataaaataatataaaacgaaacaaaa 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ataaaatatatactcgtaatacaacaaaaataatataaaataatataaaacgaaacaaaa 98
Query: 292 ctaaattatatttaaaagataataactatacgaaaaaaaaaacaagtgatctagtgttta 351
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 99 ctaaattatatttaaaagataataactatacgaaaaaaaaaccaagtgatctagtgttta 158
Query: 352 aaatatattatgtgatagacctaatattttttacaagtgattgataattttgacgtgaga 411
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 159 aaatatattatgtgatagacttcatattttttacaagtgattgataattttgacgtgaga 218
Query: 412 ttaagcaaaatggcgaccgcttgaagttacgtgtggtgattattatcaacatgctaacga 471
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 219 ttaagcaaaatggcgaccgcttgaagttacgtgtggcgattattatcaacatgctaacga 278
Query: 472 tgtcgacactcatgatgccagctgctacgatgaccactatgacgaatgctggtcccatac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgtcgacactcatgatgccagctgctacgatgaccactatgacgaatgctggtcccatac 338
Query: 532 cggttgctgccgcaaccaagctagagccaaagctgctgcaattgccgcacccagcactaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cggttgctgccgcaaccaagctagagccaaagctgctgcaattgccgcacccagcactaa 398
Query: 592 tgccgcaaataccacaacagcaacaccaccaccaacacccacacgggaacaacaataaac 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgccgcaaataccacaacagcaacaccaccaccaacacccacacgggaacaacaataaac 458
Query: 652 tcgaacactaccacatcttcgtcggtgatctcagcccggagattgagacgcagaatctca 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcgaacactaccacatcttcgtcggtgatctcagcccggagattgagacgcagaatctca 518
Query: 712 gagacgccttcgccccattcggcgaaatatcggattgtcgcgtcgttcgtgatcctcaga 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gagacgccttcgccccattcggcgaaatatcggattgtcgcgtcgttcgtgatcctcaga 578
Query: 772 cgctcaaatctaagggatacggtttcgtgtccttccttaagaaatccgaagcggagtcag 831
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 579 cgctcaaatctaaaggatacggcttcgtgtccttccttaagaaatccgaagcggagtcag 638
Query: 832 ctataacggctatgaacggccagtggttggggtcgaggtctatacgaactaactgggcga 891
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 639 ctataacggctatgaacggccagtggttggggtcaaggtctatacgaactaactgggcga 698
Query: 892 caaggaaaccaccagctccaaaaaacgaactaaactcaaag 932
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 caaggaaaccaccagctccaaaaaacgaactaaactcaaag 739
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,059
Number of extensions: 10449
Number of successful extensions: 10449
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10447
Number of HSP's successfully gapped: 1
Length of query: 1738
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1721
Effective length of database: 8,119,229
Effective search space: 13973193109
Effective search space used: 13973193109
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)