BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10361 (UTR included)
(2626 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A1A03 1457 0.0
>BF01013A1A03
Length = 887
Score = 1457 bits (735), Expect = 0.0
Identities = 744/747 (99%)
Strand = Plus / Plus
Query: 1880 cttcttcaaaggcaaaggtttttggaagttcaacgatctacagatgcgagtcgagaacga 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cttcttcaaaggcaaaggtttttggaagttcaacgatctacagatgcgagtcgagaacga 70
Query: 1940 acgtcaaaccccgtccgcgcctatctggatgtcatgtcctatcgaacggacgggacgacg 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 acgtcaaaccccgtccgcgcctatctggatgtcatgtcctatcgaacggacgggacgacg 130
Query: 2000 agcgccgttcagagcactcccagccccgggatcaacactacgctctcccagccgagccac 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 agcgccgttcagagcactcccagccccgggatcaacactacgctctcccagccgagccac 190
Query: 2060 tctcaacaaacatagtctactgccgtatctagcttctctaattattatactagcccgctc 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tctcaacaaacatagtctactgccgtatctagcttctctaattattatactagcccgctc 250
Query: 2120 tctttagtctataattctataatgtgtcacacttgacagttgacactagaaagttctaat 2179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tctttagtctataattctataatgtgtcacacttgacagttgacactagaaagttctaat 310
Query: 2180 atctcgtgctgttcggaaacgtgttactgaacaaacaagtacatatcggtatcgtctgat 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atctcgtgctgttcggaaacgtgttactgaacaaacaagtacatatcggtatcgtctgat 370
Query: 2240 aggataagtaagcgcaatccatgcactgcctattatagtaattaaattattgtatcgtaa 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aggataagtaagcgcaatccatgcactgcctattatagtaattaaattattgtatcgtaa 430
Query: 2300 atgacgtaacttttaatctcctaggctaattcttatatgatgcatttttatataaaattt 2359
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atgacgtaacttttaatctcttaggctaattcttatatgatgcatttttatataaaattt 490
Query: 2360 taatgctatatatgtacattttgatctcaatatgatcgatttctttttatttgatgtaag 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taatgctatatatgtacattttgatctcaatatgatcgatttctttttatttgatgtaag 550
Query: 2420 gtacataacaccatttatttagcttctgtacagattatgtagtttcgatgtcagtattgc 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtacataacaccatttatttagcttctgtacagattatgtagtttcgatgtcagtattgc 610
Query: 2480 tatgaacttactataacacattacgttaataacatagtaatcttttataaataggaaagg 2539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 611 tatgaacttactataacacattacgttaataacatagtaatcatttataaataggaaagg 670
Query: 2540 taatccgttattgtattattttagtagcaaaaagctgtcttttgaaaaattaagaataaa 2599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 taatccgttattgtattattttagtagcaaaaagctgtcttttgaaaaattaagaataaa 730
Query: 2600 atactataactaatattaagactatta 2626
||||||||||||||||||| |||||||
Sbjct: 731 atactataactaatattaatactatta 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,658
Number of extensions: 5292
Number of successful extensions: 5292
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5292
Number of HSP's successfully gapped: 1
Length of query: 2626
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2609
Effective length of database: 8,119,229
Effective search space: 21183068461
Effective search space used: 21183068461
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)